3D Structure for MZ333461_CDS_0017 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.82 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MZ333461_CDS_0017 1 AcrIIA27 0.70 View Alignment MZ333461_CDS_0017 M I R K Q L L F E L E V E V D E P M V G S N A Y -R R -V T K T T R L Y A Y S F D D A Y H A F R E N -H --------(60)
M + F + V + + ++ A + +A + RE
AcrIIA27 M -K ---T F N I I V S E S A N L K E H S S -E -L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N
MZ333461_CDS_0017 ----------R -Y -I I -K S I K E V E E Q (86)
+ + + VEE
AcrIIA27 M R D L T A I D N T H R -R A W G R R Y L R V E E A
MZ333461_CDS_0017 2 AcrIE2 0.58 View Alignment MZ333461_CDS_0017 M I R K Q L L F E L E V E V D E P M V G S -N A Y -R R -V T K T T R -L Y A Y S -F D D A -Y H A F R E N -H ----(60)
M + L ++ R T + A A + E
AcrIE2 M -N -T Y L --I D -P R K -N -N -D N -S G E R -F -T V D A V D I T A -A A K S -A A Q Q I L G E -E F E G L V
MZ333461_CDS_0017 --------R -Y I I K S I K E V -----------------E -E Q (100)
+
AcrIE2 Y R E T G E S N G S G M F Q A Y H H -L H G T N R T E T T V G Y P F H V M E -L
MZ333461_CDS_0017 3 AcrIC9 0.57 View Alignment MZ333461_CDS_0017 M I R K -Q L L F E L E V E V D E P M V G S N A Y R R V T K T T R L Y A Y ---S F D D A Y H A F R E N -H R Y I I K S (60)
M K + + D + +
AcrIC9 M E T K M T S F Y K -I T A --Y ---------N -S Q A -L Y F W G T D A D V D R Y V D W L N R -D R E I N V Y A
MZ333461_CDS_0017 I K E V -----------------------E ----E Q (94)
+ + + E
AcrIC9 A E A I P E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
MZ333461_CDS_0017 4 AcrIC8 0.53 View Alignment MZ333461_CDS_0017 M I R K Q L L F E L E V E V D E P M V G S N A --Y ----R -R -V T K T T R L Y A Y S F D D A Y H A F R E N H ---(60)
M + + G + + R + +A +
AcrIC8 M Y -A --I R -K ---I Q -F F Y G P T -D K -K S Y V G E -E A G G R -R E L F K T R A E A Q A R I E D L E E G V
MZ333461_CDS_0017 --------R ---Y I I K S I K E V ---E ------E Q (93)
Y I ++ E
AcrIC8 Y Y L A H N E S G R P D Y K I V W V R G E A Q F E H A R W M R -G
MZ333461_CDS_0017 5 AcrIF19 0.52 View Alignment MZ333461_CDS_0017 M I R K -----Q -L L F E L E V E V D E P M V G S N A Y R -R V T K T T R L Y A Y S F D -D -A Y H A F R E ----(60)
M L E + + ++ + AF
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y D -E --Y G --F E -Y S V K L K I S V R D Y R G -I D V S A F N A F P E W
MZ333461_CDS_0017 --N -----H ------------R Y I I K -S I -K -E V -----E --E Q (104)
K +
AcrIF19 E D -T L R M R D R V M S V E E I E N A M I S R Y K S L -F -I A P P D C T Y -E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;