3D Structure for MW960038_CDS_0012 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MW960038_CDS_0012 1 AcrIE6 0.68 View Alignment MW960038_CDS_0012 M I D P V H E C R L L ----Q I M S A Y R Y K W A Q D -D R L --S E -G -C -R A A ----H I R Y A A F Y A A K A (60)
M + + + L + + +A A +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T -A -V M -V T Y D L I G K Q L A S R R A E L
MW960038_CDS_0012 R E I L F Q L I G D ----N E D -E -S -I (83)
EIL
AcrIE6 I E I L E E Q Y P G H A A D L S -I K N L C P
MW960038_CDS_0012 2 AcrIF23 0.58 View Alignment MW960038_CDS_0012 M I D P V H ---E -C ----R ----L ---------------L ---------------Q ------(60)
M
AcrIF23 M T N F Q T W L D S A -D I P V Q Q N G Q -W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MW960038_CDS_0012 ----------I -------M ---S -A -Y -R Y K -W -A -Q D D R L S E G C R A A H I R -Y A A -F Y -A (120)
+ + ++ +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V -Q -Q M N -Q -D -Q A E M A C D P S G L L T A A K F -W I E N -R -
MW960038_CDS_0012 A -K ----A -R -E --------I -L -F Q -L -I G D ----------------N E D -E -S --I (178)
AcrIF23 N D -S A Q E -I -A -G F V M Q Q K A -L -L A -Q -H R S -A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MW960038_CDS_0012 3 AcrIIC4 0.56 View Alignment MW960038_CDS_0012 M I -D P V H E C -----------R -L L -----------Q I M S A Y R Y ----K W A -Q D D R L S E G C (60)
M L + + + S
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F -F K N E N Y S K E L
MW960038_CDS_0012 R A A H I -R Y A A F Y A A K A R E I L F Q L I G D N E D E S I (92)
+ + K+ ++ + + +
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D L -A E K Q -G I Q F
MW960038_CDS_0012 4 AcrIF12 0.54 View Alignment MW960038_CDS_0012 M -I ---D P V ----H -E -C -------R L ----L --------------Q -------------(60)
M R
AcrIF12 M A Y E K T W H R D Y A A -E -S -L K R A E T S R W T Q D A -N L E W T Q L A L E C A Q V V H L A R Q V G E E L G N E
MW960038_CDS_0012 ---I ----M -S ----A Y R Y -----K -W A -Q -D -D -R L S E G C R A A H I R Y A ----A -F Y A A K (120)
+ ++ + + + A +
AcrIF12 K I I G I A D T -V -L S T I E A H S Q A T Y R -R P -C -Y -K -R -I T T A Q T H L L A V T L L E R F -G -S A R R
MW960038_CDS_0012 A R E I L F Q L I G D N E D -E S I (138)
+ +++QL D D +
AcrIF12 V A N A V W Q L T D D E I D Q A K A
MW960038_CDS_0012 5 AcrIE1 0.53 View Alignment MW960038_CDS_0012 M -I ---D P V H E C -----------R L -L --------Q -I --------M -S A -Y -R Y K -W A Q (60)
M D A+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S -L E E A A S I L -S -L I V F Q A E T -L -S D -Q -A N E L A N
MW960038_CDS_0012 D D R -L ---S E -G -C R -A A H I R -Y -A -A F Y A -A K A R E ---I L F Q L I G D N E D E S -I (114)
R I A E + GD D
AcrIE1 Y I R R Q G L E E A E -G -A C -R N I D I -M -R A K W -V E V C G E V N Q H G I R V Y G D A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;