3D Structure for MW430345_CDS_0039 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 81.23 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MW430345_CDS_0039 1 AcrIE6 0.76 View Alignment MW430345_CDS_0039 M K D T I K M Y Q E R I K Y F T K E I S R M L D L I D N A E I --H E L N D I L A S ---V -D -D -L -K R L -R -A (60)
M IK F + D + ++EI + + ++ +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G -K -Q -L A S -R -R -
MW430345_CDS_0039 -D -A E R M ----L -E F Y E ------A --R (87)
+
AcrIE6 A -E L I E I L E E Q -Y P G H A A D L S I K N L C P
MW430345_CDS_0039 2 AcrIE1 0.66 View Alignment MW430345_CDS_0039 M K D ----T I K M -Y -Q ----E -----------R --------I -K -Y F T K ----E I S R M L D L (60)
M ++ +
AcrIE1 M E K K L S D A Q V -A -L -V A A W R K Y P D L R E S L E E -A A S I L S L I -V -F -Q A E T L S D Q A N E L A N Y
MW430345_CDS_0039 I D N A E I H E L N D I L A S V D D L K R L R A D ----A -E -R -M L E F Y -E ---A ---R (110)
I + E+ + ++D + ++
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E -V -N -Q H G I R V Y G D A I D R D V D
MW430345_CDS_0039 3 AcrIIC4 0.64 View Alignment MW430345_CDS_0039 M K D ---T I K M Y Q -------E -----------R I ----K -Y F T K E I S R M L D L I D ---N A E I (60)
MK + I S D
AcrIIC4 M K I T S S N F A T I -A T S E N F A -K L S V L P K N H R E P I K G L F -K S A V E Q F S S A R D F F K N E N Y -S K
MW430345_CDS_0039 H E L -N D I -L A S V D D L K R L R A D A E R M L E F Y E A -R (93)
+ V ++ A +E +
AcrIIC4 E L A E K -F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
MW430345_CDS_0039 4 AcrIF23 0.58 View Alignment MW430345_CDS_0039 M K D T I K M ---Y Q ---------E --------------------------------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MW430345_CDS_0039 ---------------R ----I -----------K -Y -F T K E -I S -R M L -D L I D -N ---A E I (120)
+ I N +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C -D -P S G L -L T A A -K F W I -E N R N D -S A
MW430345_CDS_0039 H E L N D I L A S V D D L K R L R A --------D ----A E R M L E F Y E -A --R (165)
E+ + + L + D +
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MW430345_CDS_0039 5 AcrIF25 0.55 View Alignment MW430345_CDS_0039 M K D ----T I K ----M -Y -Q -E ----------------------R --------I K Y F T K E I (60)
M E I E+
AcrIF25 M D N D D K K P D A L I H L R V -P -A E V K G R W V K E S R L E G M K L T D W I T G -R V E A K A L S I A E V L E E A
MW430345_CDS_0039 S R M L D L I D ----N ----A -E I H E L N D I L A S V D D L K R L -------------R A D A ------(120)
M+ ++ + + I ++ +
AcrIF25 A A M A R S L E D S P I F Y R N K -L C A D G I V T I Q Q Q A A R F S A -A T D D A T R L D A A L W A R E -G Y Q L L S
MW430345_CDS_0039 --------------------------------E R -------M L E F Y -E -A -R (172)
L R
AcrIF25 S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;