3D Structure for MW419087_CDS_0036 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.70 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MW419087_CDS_0036 1 AcrIE1 0.71 View Alignment MW419087_CDS_0036 M K G M F N M C K T K M N D L L K F K L D Q I R N T V S N A Q K H -R Q M D L D T T Y T I L D K S L E L I H D Y Q E -R (60)
M +D+ + ++ + L LI E
AcrIE1 M E K K -------L S D A Q V A ----L V A A W R K ----Y -P D L R E S L E E A -A S I L S L I V F Q A E T L
MW419087_CDS_0036 L D N L E I E N E W L K K K E --------E -Q T -E K R I T N L I W H I E T N K D T L G D R E T L I A V Y K S L R (120)
D++ +++ + + + + + + +
AcrIE1 S D Q A N E L A N Y I R R Q G L E E A E G A C -R N -I D I M R A K W V E V -C G E V N Q ----H G I R V Y G D A I D
MW419087_CDS_0036 N L K N L Y (126)
+
AcrIE1 R D --V D
MW419087_CDS_0036 2 AcrIE6 0.60 View Alignment MW419087_CDS_0036 M K G M F N M C K T K M N D L L K F K L D -Q I R N T V S N A Q K H R Q M D L D T T -Y T I L D K S L E L I H D Y Q E R (60)
M +++ ++ ++D + +
AcrIE6 M N --------N D T E V ---L E -Q ----Q I -----------K A F E -L L A D E L K D R L P T L E I L
MW419087_CDS_0036 L D N L E -I -E N E W L K K K E E Q T E K R I T N L I W H I E T N K D -T L G D R E T -L I A V Y K S L R N L K N -L (120)
Q R LI +E + + ++N
AcrIE6 S P M -Y T -A V M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G H ---A A -D -L ---S -I K N ---L -
MW419087_CDS_0036 -Y (122)
AcrIE6 C P
MW419087_CDS_0036 3 AcrIC3 0.60 View Alignment MW419087_CDS_0036 M K G M -F N -M C K T K -----M -N -D -L L K F K L D ---Q I R N T -V S N A Q K H R Q M D L D T T -Y T I L (60)
M + R
AcrIC3 M S I Q V T -S T N G R T V N L E I E L -G -S V -V A S S G Q V K F M A D K T -D R G L E S R F L ----V P ----
MW419087_CDS_0036 -D -K S L E L I -H -D Y --Q -E R L D N L E I E -N E W L K K K E E Q T E K R I T N -L -I -W H -I -E -T -N (120)
+ + E
AcrIC3 E -A -----G N -R R I E V -A -------L -T ----G R D L E A A N A ----L -F -S -E L -A -A -S -
MW419087_CDS_0036 -K -D T L -G D -R -E T -L -I -A -V -Y -K -S L R N -L K N L Y (157)
T +
AcrIC3 V -E A T N E -M Y -R -E L -D -A -E -R -A -Q -I N K A -L E -G
MW419087_CDS_0036 4 AcrIIA19 0.56 View Alignment MW419087_CDS_0036 M K G M F N M C K T -K M N D L L K F K L D Q I R N T V -S N A Q -K H -R Q M -D L D T T Y T I L D K S L E L I H D Y (60)
MK ++ ++ N + ++ + +
AcrIIA19 M K -L ---I -V E -V ---E ----E T N Y K N L V -N Y T K -L T N E -S H N I L V N R L I S E Y I T K P Y E L
MW419087_CDS_0036 Q E R L -D N L E -I E N E W L K K K E E -Q -T -E K R I T N L I -W -H I E T N K D T ----L --------G -(120)
L + + K ++ + + ++ +
AcrIIA19 R L D L S E R Y S N R D L I E F K F M L I E -Y -C K E A L Q D I -K -E -L A N S D E A Y E T D -E A F E A V F R Q L
MW419087_CDS_0036 ------D R E T -L I A V Y -K S L R N L -K N L Y (148)
+T + + S +
AcrIIA19 F E E V I S N P D T V -L K A F H -S Y T S F L E E N K
MW419087_CDS_0036 5 AcrIF23 0.54 View Alignment MW419087_CDS_0036 M K G M F N M ---C -K --------T --K ----------------M N --D L L K -----------(60)
M + L
AcrIF23 M T N F Q T W L D S -A D I P V Q Q N G Q W I D -L E T G I A Y D P S Y N Y A A N T -R R A S L -S P R G I D A R A V A
MW419087_CDS_0036 F -K L D ----Q I R -N -T V -S -N A -Q K H R Q M D L D T T Y T I L D K S L E L I H D Y Q E R L D N L E -I -E (120)
+ + K R + + + + +
AcrIF23 -K T F G G R A L T G T A -R Q -K -E -W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E -N -
MW419087_CDS_0036 -N E W L K K K E E Q T E K R I T N L I W H I E T N K D T -L G D R E T L I A V Y K S L R N L K N L --Y (173)
L+ + K G + ++ + L
AcrIF23 R -N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A -A -G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;