3D Structure for MW084976_CDS_0232 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.04 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MW084976_CDS_0232 1 AcrIE6 0.75 View Alignment MW084976_CDS_0232 M K T -L D V I L K K R E E L R S K L N D L E S N K F K Y S I S K W S E M S D P D K K E Y S Y L M S T I N A I S I Q I D (60)
M + +V+ + +L Y+ +M T +I Q+
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P -T ---L ----E I L -S P M Y T A V M V T Y D L I G K Q L A
MW084976_CDS_0232 A L T Y V I N Y ----D S -E -L R S -F E E -K P K F K Y (91)
+ K
AcrIE6 S R R A E L I E I L E E Q Y P -G H A A D L -S I K N -L C P
MW084976_CDS_0232 2 AcrIE1 0.64 View Alignment MW084976_CDS_0232 M -K ----T L -D V I L ----K -------K ----R -E -E -L -R S ----K L N D L E S N K F K Y S I S (60)
M K ++ + S + L +
AcrIE1 M E K K L S D A -Q V A L -V A A W R K Y P D L R E S L E E A -A -S -I -L -S L I V F Q A E T L S D Q A N E L A N Y
MW084976_CDS_0232 K -W S E M S D P D K K E Y S Y L M S T I N A I S I Q I D A L T Y V I N Y D -S E L R S F E E K P -K F -K Y (115)
E + +I + + + +N +
AcrIE1 I R -R -Q ---G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D --A I D -R D V D
MW084976_CDS_0232 3 AcrIF23 0.60 View Alignment MW084976_CDS_0232 M K T L D V I L -K K ---R E -E -L R S -K L N D -L E S ------N K F -K ---------Y --S I ----(60)
M + L + D E+
AcrIF23 M T N F Q T W L D S A D I P V -Q -Q -N G Q W I -D L -E T G I A Y D P --S Y N Y A A N T R R A S L S P R G I D A R
MW084976_CDS_0232 ---------------S ----K W -S E -M S D P D K K E Y S Y L M S T I -N A I S -I Q I D A L T Y V I N - (120)
+ + A+ I
AcrIF23 A V A K T F G G R A L T G T A -R Q K E W -A E -K I R A E K V Q Q M N Q D Q A E M A C D P -S G L L T A A K F W I E N
MW084976_CDS_0232 --Y -D ---S E ----L -------R S F ------------E E -K P K -F ---K Y (170)
RS
AcrIF23 R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MW084976_CDS_0232 4 AcrIIC4 0.60 View Alignment MW084976_CDS_0232 M K -T L D V I L -----K ----------K -R E -E ----L R S K L -N D L E S -N K F K Y S I --S K W S (60)
MK T + R L + S +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R -E -P I K G L F K S A V E -Q F S S A R D F F K N E N -Y S K
MW084976_CDS_0232 E M -S D P D K K E Y -S Y L M S T I N A I S I Q I D A L T Y V I N Y D S E L R S F E -E K P K F -K Y (112)
E A++ ++ L+ +I
AcrIIC4 E L A E K ----F N K E -------A V N E A V E K L Q K A I D -L ------A E K Q -G I Q -F
MW084976_CDS_0232 5 AcrIF3 0.58 View Alignment MW084976_CDS_0232 M -K T L D V I -L -K K R E E L R S K L N D L -E S N K F K Y S I S K W S E M S D P D K K E Y S Y L -M S T I N A I S (60)
M T + + + S+ ++ S ++
AcrIF3 M S S T --I -S -D -R ---I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S S F A A R L H E G L Q
MW084976_CDS_0232 I Q I D A L -T Y V I N -Y D ----------S E L ---------------R S ------F --------(120)
+++ L
AcrIF3 A T V L Q R L V D E S -N -R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N
MW084976_CDS_0232 ----------------E E -K -P -K ---F -K -Y (152)
+
AcrIF3 V G V A W G S H V H G R L M A I F Q D R F Q Q -H Y E -D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;