3D Structure for MT682708_CDS_0076 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 93.69 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MT682708_CDS_0076 1 AcrIIA7 0.90 View Alignment MT682708_CDS_0076 M S E -E I -K V H F T N Y I G T K C V N G F K M N K E T Y C K L R G W D V P A N E D P L E V G Y L V E Y P D S K P N H (60)
M+ +
AcrIIA7 M T F G Q A L E S L K R ------------------------------------------------
MT682708_CDS_0076 E Q F R G Y I S W S P R V A F E A A Y C D V D K G C T F G H V V E L I K L G H R L T R K S W N G K G M Y I T L V P G E N (120)
H + RK WNGKGM I E
AcrIIA7 ----------------G ---------------------H L V A R K G W N G K G M F I F -M R P E D
MT682708_CDS_0076 W -A M ----D K ---------------H -E -N T ---V C E K R D W L G I K T V D D Q F M -P W V P S Q S (180)
+ L K +D + W+ SQ+
AcrIIA7 S L P T N M I V -N Q V K S L P E S F K R W V A N N H -G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T
MT682708_CDS_0076 D V L A E D W V I -L (191)
D LA DWVI
AcrIIA7 D M L A N D W V I V E
MT682708_CDS_0076 2 AcrIE9 0.84 View Alignment MT682708_CDS_0076 M S E E I K V H F T N -Y I G T K C V N G F K M N K E T Y C K L R G W D V P A N E D P L E V G Y L V E Y P D S K P N H E (60)
M + + +
AcrIE9 M E M Q --I N -S R K -L ----------------------------------------------
MT682708_CDS_0076 Q F R G Y I S W S P R V A F E A A Y C D V D K G C T F G H V V E L I K L G H R L T R K S W N G K G M Y -I T L V P G E -(120)
G+ +T G Y + G
AcrIE9 ------------------------------------G R T I T F S R -P G -A S Y I F A D L N G K S
MT682708_CDS_0076 N W A M D K H E N T V C E K R D W L G I K T V D -D Q F M P W V P S Q S D V L A E D W V I L (166)
+ + + D D +
AcrIE9 G T L G C Q I C S G G G T ---M G S T L S Y D G D D Q A Q F E A I C R R W Y R A H V R G E
MT682708_CDS_0076 3 AcrIIA4 0.83 View Alignment MT682708_CDS_0076 M S E -E I K V H F T N Y I G T K C V N G F K M N K E T Y C K -L R G W D V P A N E D -P L E V G Y L V E Y P D S K P N (60)
M+ ++ N K T G ++
AcrIIA4 M N I N D L I R E I K N ----K ---D -----Y T V K -L -S G T --D --S -N S -I T Q L I I R V N N --D -
MT682708_CDS_0076 H E Q F R G -Y -I -S W S P R V A ----F -E -A -A -Y C D V -D K G C T F G H V V -E L I K L G H R L T R K -S (120)
+ + E +T K
AcrIIA4 -G N E -Y V -I S E -S E N E S I V E K F -I -S -A -F K N G W N Q E ---Y E D E -E E F Y N D M Q T I T L K S -
MT682708_CDS_0076 W N G K G M Y I T L V P G E N W A M D K H E N T V C E K R D W L G I K T V D D Q F M P W V P S Q S D V L A E D W V I L (179)
+
AcrIIA4 E --------------------------------------------------------L N
MT682708_CDS_0076 4 AcrIF19 0.82 View Alignment MT682708_CDS_0076 M S E E I K V H F T N -Y I G T K C V N G F K M N K E T Y C K L R G W D V P A N E D P L E -V G Y L -V E Y -P -D S K (60)
M ++ N V Y
AcrIF19 M K -P L H T M --N Y -D ----------------------N -----N --Q -M S -L V -Y E -S -Y D
MT682708_CDS_0076 P N H E Q F R G Y I S -W S P --R -V A F E A A Y C -------D ---V -D K G C T F G H V V E L I K L -G H R L (120)
S + A D+ + + + + L
AcrIF19 E Y G -F E Y S V K L K I S V R D Y R G I D V S A F N A F P E W E D T L R M -R D R V M S V E E I E N A M I S R Y K S L
MT682708_CDS_0076 T R K S W N G K G M Y I T L V P G E N W A M D K H E N T V C E K R D W L G I K T -V D D Q F M P W V P S Q S D V L -A E (180)
+ D
AcrIF19 F ---------------------------I ----------A P -P D --------C -T Y E F --
MT682708_CDS_0076 D W V I L (185)
+
AcrIF19 ---D I
MT682708_CDS_0076 5 AcrIF21 0.81 View Alignment MT682708_CDS_0076 M S E E I K V H F T N Y I G T K C V N G F K M N K E T ----Y C K L R G W D V P A N E D -P L -E V G Y L V E Y P D S (60)
M+ + G+ K + + P+ ++ S
AcrIF21 M T S I K T I E Y K ---G N T L T L -Q K D S --D A D C I S Y E I L L -R D P I K H -W V -G R D V Q I L N I D S S
MT682708_CDS_0076 K P N H E Q F R G Y I S -W -S P R -V A F E A A Y C D ----V D K -G -C -T -F G H V V E L I K L G H R L T R K S (120)
+ + F S + +I +G
AcrIF21 -T S V D V F ---Y K K -F S -D S -E L A S M M Q R E Y D D C F -P -L -Q -V T A T L E S V I E A G ---D ---
MT682708_CDS_0076 W N G K G M Y I -T L V P G E -N W A M D K -H E N T V C E K R D W L G I K T V D D Q F M -P W -V P -----S Q S D (180)
V E A +V W + + S
AcrIF21 I -N -T -K W F V -V N D E T G -A L S G K -Y G S V Y T E S G W Y I -C N E S G E K I E -N K L T E N Q I S S I R V
MT682708_CDS_0076 V L -----A -E D W V I -L (196)
+ A W
AcrIF21 A M D R G D T A T Y S W E F D D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;