3D Structure for MT375522_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.03 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MT375522_CDS_0016 1 AcrIE6 0.72 View Alignment MT375522_CDS_0016 M T K L S D ---K E -I -Q -E Y ----I G Y I K K E I E R H E N ------R ----I R -T S V E A L V N K K I (60)
M+ + +K + E L+++++
AcrIE6 M N -N D T E V L E Q Q -I -K -A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y -D L I G K Q L A S R R A
MT375522_CDS_0016 E L I K -Y ---E ----K E ----G -T V (84)
ELI +
AcrIE6 E L I E I L E E Q Y P G H A A D L S I K N L C P
MT375522_CDS_0016 2 AcrIE1 0.71 View Alignment MT375522_CDS_0016 M T K L ------S D K E I ----Q --------E -Y --------I -G --------Y -I K -K -E -I (60)
M K +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y -P D L R E S L E -E -A A S I L S L I -V -F Q A E T L S D -Q -A N -E -L -
MT375522_CDS_0016 -E -R -H -E -N -R ----I -R -T -S V E A L V N K K I E L I K Y E K E --------------G T -V (118)
+ ++ + E
AcrIE1 A -N -Y -I -R -R Q G L E E -A -E -G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MT375522_CDS_0016 3 AcrIC3 0.64 View Alignment MT375522_CDS_0016 M T -K L -S D K E ----I ------Q --------------------------------------(60)
M+ +
AcrIC3 M S I -Q V -T S T N G R T V N L E I E L -G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A
MT375522_CDS_0016 ---E Y I G Y I K K E I E R H E N R I R T S V E A L V N K K I E L I K Y E K E G T V (103)
+ + + + E +E + K
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
MT375522_CDS_0016 4 AcrIF23 0.60 View Alignment MT375522_CDS_0016 M T K --L -S D K -E ------I -Q ---------------------------------------(60)
MT
AcrIF23 M T N F Q T W -L D S A D I P V Q Q -N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MT375522_CDS_0016 -----------------------------------E Y I G ----Y I -K ----K E I E R ---- (120)
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A -A -K F W I E N R N D S A Q E
MT375522_CDS_0016 H -E N --------R -I R ----T S V E -A L V N K K I E L I K Y E K -E -G ---T V (168)
+ + K + ++
AcrIF23 -I -A G F V M Q Q K A -L -L A Q H R S A K A A G Q A D K V A K I A A E Y N A -L T A R W G F
MT375522_CDS_0016 5 AcrIIC4 0.59 View Alignment MT375522_CDS_0016 M T K L --S D K E ------I ---Q -------E Y I G -Y I -K ----K E I E R H E N -----------(60)
M + + E I +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G -L F -K S A V E Q F S S A R D F F K N E N Y S K E L
MT375522_CDS_0016 ---R -I -R -T S V E A L V N K K I E L I K Y E K -E G -T V (93)
V +V K +I G +
AcrIIC4 A E K -F -N -K E A V N E A V E K L Q K A I D L A E K Q G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;