3D Structure for MT119360_CDS_0112 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.22 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MT119360_CDS_0112 1 AcrIE6 0.74 View Alignment MT119360_CDS_0112 M T -K -Q -T -M E N K I N E L R K E A G L M Y G D L D K A L A E --G N Y D L Y E E L G D I M S A K -Y E -E -A R (60)
M+ E+ I A L + Y + D+
AcrIE6 M N N D T -E -V L E Q Q I K A F E L L A D E L K D R L P T L -E I L S P M Y T A V M V T Y D L I G K Q L A -S -R R A
MT119360_CDS_0112 Q L I I E F N E T F G E -T ---P -N --L L -F (86)
LI E+ L
AcrIE6 E L I E I L E E Q Y P G H A A D L -S -I K N L C P
MT119360_CDS_0112 2 AcrIIC4 0.60 View Alignment MT119360_CDS_0112 M -T -K Q T M E N --------K I -N E -----------L R K E A G -L M Y G D L D K A L A -E -G N Y D L (60)
M ++ + K+ L K A + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y ----
MT119360_CDS_0112 Y E -E -L -G D I M S -A K Y E E A R Q L I I E F N E T F G E T P N L L F (98)
EA + + + F
AcrIIC4 S K E -L -A E K F N K E -A V N E A V E K L Q K A I D L A E K Q G I Q -F
MT119360_CDS_0112 3 AcrIIA28 0.58 View Alignment MT119360_CDS_0112 M T ---K -Q -T ---M E N -K -----I N E -L R K E A G L M Y G D L D K -A L A E G N Y D L Y E E L G D I M S (60)
M + N L K A + +
AcrIIA28 M K T I F T K -K Q T E E L L N D -I S I E K Q K -E L F N S M H D F R S Q H A K E A -R --I P G W S D K Y N K L E K
MT119360_CDS_0112 A K Y E E A R Q L -I -I -E -F N E T ------F -G E T P N -L ---L F (100)
+ + T N
AcrIIA28 K M L S D F E E V T -G -I -K Y D -T L E S E L I -W D N L S N K F L Y N -S
MT119360_CDS_0112 4 AcrIE1 0.56 View Alignment MT119360_CDS_0112 M --T ----K Q -T -M E -N ----------K I N E --------L R K ---E A -G -L M Y G D L D K A L (60)
M + + + +L +
AcrIE1 M E K K L S D A Q -V -A L -V A A W R K Y P D L R E S L E -E A A S I L S L I V F Q A E T L S -D -Q A N E L A N Y I
MT119360_CDS_0112 A E G N Y D ---L Y E E L G D -I M S -A K -Y E -E -A -R -Q -L I -I E F N E T F G E T P N L -L F (114)
+ D M K + G+ +
AcrIE1 R R Q G L E E A E G A C R N I D I -M R A -K W -V E -V -C -G -E V -N Q H G I R V Y G D A I D R D V D
MT119360_CDS_0112 5 AcrIF23 0.56 View Alignment MT119360_CDS_0112 M -T K Q T -M E ---N ----K I N E ---------------------------L R ----------(60)
M + QT +
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R -G I D A R A V A K T
MT119360_CDS_0112 -----K -----------E ---------------A G L -M Y G D L D K A L A E G N Y -D L Y E E L G D (120)
L A+ +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L L T A A K F W -I E -N R N D S A Q
MT119360_CDS_0112 I M S A K Y E E A R Q L I I E F N E T ----F -------------G -E T P N -L -L -F (169)
+ L++ F
AcrIF23 E I A G F V M Q Q K A L L A Q H R S -A K A A -G Q A D K V A K I A A E Y -N A L T -A -R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;