3D Structure for MN908685_CDS_0070 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.73 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MN908685_CDS_0070 1 AcrIE6 0.72 View Alignment MN908685_CDS_0070 M S R T Y E E V L E R F R T R M S E A N H W R S R V A E F -G E ----L -D S L Y K M H Y A R E R A N E L A W V L E G (60)
M+ E + + A + R+ + + L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y -T A V M V T Y D L I G K Q L A S R R A E L I E
MN908685_CDS_0070 Y -D E E R G R A P V V G G ----P --A -T (84)
+E +
AcrIE6 I L E E Q Y P G H A A -D -L S I K -N L -C P
MN908685_CDS_0070 2 AcrIIC4 0.63 View Alignment MN908685_CDS_0070 M S R ---T Y E E V --L E ------------------R -F -R ----T R M S E A N H W R S R V A E F G E (60)
M + + E S A +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G -L -F -K S A V E Q F S S A R D F F K N E -N Y S K
MN908685_CDS_0070 L D S L Y K M H -Y A -R E R A N E L A W V L E G Y D E E R G R A P -V V G G P A T (102)
+ E + L + G
AcrIIC4 E L A E K F N K E A -V N E A V E K L Q K -A I D L ----A E --K -Q -G I Q F
MN908685_CDS_0070 3 AcrIE1 0.61 View Alignment MN908685_CDS_0070 M S R ---T -Y -E E V -----------L ---E ----R F R --------T R M S E A -N H W R S R V A E (60)
M + E T N + +
AcrIE1 M E K K L S D A -Q V A -L V A A W R K Y P D L R E S L E E A A S I L -S L I V F Q A E T L S D Q -A N E L A N Y I R R
MN908685_CDS_0070 F G E L D S ----L Y K M H Y A R E R A N E L A W V L E G Y D E E R G R A P V V G G P A T (106)
G R + E+ + + +
AcrIE1 Q G L E -E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D R D V D
MN908685_CDS_0070 4 AcrIF23 0.58 View Alignment MN908685_CDS_0070 M S R --T -Y -E -E -V -----L --E --R F R --------------------------------(60)
M+ T
AcrIF23 M T N F Q T W -L -D -S -A D I P V Q Q N -G Q W I -D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A
MN908685_CDS_0070 --------------T ----R M -S -E -A -N H -W R S R V A E -F -G ------E L D S -L Y K M H Y A (120)
+ L +
AcrIF23 V A K T F G G R A L T G T A R Q K E W A -E -K -I -R A -E K V Q Q M N -Q -D Q A E M A C D P S G -L L T A A K F W
MN908685_CDS_0070 R E R A N E L A W V L E G Y D -E -E -R G -------------R ------A P V -V G G P ---A -T (176)
E N+ A + G + +
AcrIF23 I E N R N D S A Q E I A G F -V -M -Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MN908685_CDS_0070 5 AcrIF25 0.54 View Alignment MN908685_CDS_0070 M S R ------------T Y E E V L -E ----------------------R -F -R -T -------R (60)
M EV +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A -K -A -L S I A E V L E E -
MN908685_CDS_0070 -M -S -E -A -N H W R -S ----R V A E -F ----G -----------E -L D S -L Y K M H Y A R E R A N E (120)
G + A A E
AcrIF25 A -A -A -M -A R S L -E -D S P I F Y R N K -L C A D G I V T I Q Q Q A A R F S A A T -D D A T R L D A A L W A R E
MN908685_CDS_0070 L A W V L E -G Y D E E R G -----------------------R -------A -P -V -V G G --P -A -(180)
+L G + +GG
AcrIF25 G Y Q L L S S G L P D S Y -S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q -Q -E L G G A G K E D G
MN908685_CDS_0070 T (181)
AcrIF25 R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;