3D Structure for MN689509_CDS_0053 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.08 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MN689509_CDS_0053 1 AcrIIA27 0.71 View Alignment MN689509_CDS_0053 M K K F R L I S -N S F L -K E D -G Q L H -S R Q K F V E A N S L A D L I Q D I E S N A G W Y A G N -T --V A -F K (60)
MK F +I S KE L + VEA + ++ + +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
MN689509_CDS_0053 V ----------A -Y I E E V V -E (81)
V
AcrIIA27 -I D N T H R R A W G -R R Y L R V E E A
MN689509_CDS_0053 2 AcrIE2 0.66 View Alignment MN689509_CDS_0053 M K K F R L I S N S F L K E -D G Q L H S R Q K F -V E -A N S L A D L I Q D I E S N A G W Y A G N -T V A F K V A Y I (60)
M I + G + + D+ + S A +G
AcrIE2 M N T Y L -I D P R K N N D N S G E R F ---T -V -D A ---V -D I T A A A K S A A Q Q I L G E E F E G L V ---Y
MN689509_CDS_0053 E E V -------------------------------V -E (97)
E
AcrIE2 R E T G E S N G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
MN689509_CDS_0053 3 AcrIC9 0.60 View Alignment MN689509_CDS_0053 M -K ---K -F -R L I S N S F L K E D G Q L H S R Q K F V E A N S L A D L I Q D I E S N A G W Y A G N T V A F K V A (60)
M ++ S + AD+ ++ V
AcrIC9 M E T K M T S F -Y K I T A -Y -------N -S Q A L Y -F W G T D A D V D R Y V D W L N R -D R -E ---I N V Y
MN689509_CDS_0053 Y I E E V ---------------------------V -E (95)
+E + +
AcrIC9 A A E A I P E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
MN689509_CDS_0053 4 AcrIC8 0.58 View Alignment MN689509_CDS_0053 M K K F R L I S N S F L -K E D G -Q L -----H S R Q K F V E A N S L A D L I Q D I E S N ---A G W Y A -G ---(60)
M + +F + A++ IE + Y+
AcrIC8 M Y -A -I R K I Q F F Y G P T D K K S Y V G E E A G G R -R E L F K T R A E A Q A R I E D L E E G V -Y Y L A H N E S
MN689509_CDS_0053 N -T V A F K V A Y I E E ---V ------V -E (86)
K++ +
AcrIC8 -G R P D Y K I V W V R G E A Q -F E H A R W M R G
MN689509_CDS_0053 5 AcrIF9 0.56 View Alignment MN689509_CDS_0053 M K -K F R L I S N S F L K E D G Q L H S R Q K F V E A N S L A D L I Q D I E S N A G W Y A G N T V A -F K V A Y I E E (60)
MK + + + +EA+SL + + V IE
AcrIF9 M K A A Y I I K E -V Q -N I -N S E R -E G T Q I E A T S L S Q A K R I A S K E Q -C F --H ---G -T V M R I E T
MN689509_CDS_0053 V ------------V ----E (79)
V
AcrIF9 V N G L W L A Y K E D G K R W V D C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;