3D Structure for MK929790_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.49 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MK929790_CDS_0005 1 AcrIE6 0.72 View Alignment MK929790_CDS_0005 M T Y V E T -P L E T A L R K F H E A A H A L G M I -D A -A L D A H R N A A A Q L E R E H D A A Y R A Y T V A Q R D L (60)
M+ LE+ ++ F +A L L++ + D++ + +L
AcrIE6 M N N D T E V -L E Q Q I K A F E L L A D E L K D R L -P T -L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
MK929790_CDS_0005 L K A A Q D -E ---G -S -T P ---H -D (83)
+ ++ + +
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L -C P
MK929790_CDS_0005 2 AcrIE1 0.69 View Alignment MK929790_CDS_0005 M T -Y ---V E T ----------P ----L E T ----A L R -K -F -H -E A A H -A ----L G M I D A A L (60)
M + LE L A + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L S L -I -V -F -Q A E T -L S D Q A N E L A N Y I
MK929790_CDS_0005 D -A H -R N A A A Q L E R E H D A A Y R A Y T V A Q R D L L K A A Q D E G -S -T -P -H -D (108)
A + R D+ + ++ D
AcrIE1 R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G -D A I D R D V D
MK929790_CDS_0005 3 AcrIIC4 0.61 View Alignment MK929790_CDS_0005 M T Y V E T -P L E T ----------------A L R K F H E A A H A L G -M I D -A A L D A H R N A A A Q L E R (60)
M + T + + + + A D +N
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N -E N Y S K E
MK929790_CDS_0005 E H D -A A Y -R A Y T V A Q R D L L K A A Q D E G S T P --H D (93)
+ A + A L KA+ +
AcrIIC4 L A E K -F N K E A V N E A V E K L Q K A I D L A E K Q G I Q -F
MK929790_CDS_0005 4 AcrIC3 0.60 View Alignment MK929790_CDS_0005 M T -Y V E -T ---------P -L ---E -T -A L R ------K ----F ----H E ----A A H A -L G -(60)
M+ V T K + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S V V A -S S G Q V K F M A D K T D R G -L E S R F L V P E A G N R -R I E V
MK929790_CDS_0005 -M -I D A A L D A H R -N -A -A -A -Q L E R E H D A A Y R A Y T V A Q R D L L K A A Q D E G S T P H D (114)
L E A A + R+L
AcrIC3 A -L ---T G R -D L E -A -A -N -A -L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
MK929790_CDS_0005 5 AcrIF23 0.59 View Alignment MK929790_CDS_0005 M T Y -V ---E T ---P L E T ------------A L ---R -------------------------(60)
MT ++ P+ +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A -Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MK929790_CDS_0005 -------------K F H E ---------------A A -------H A L G M I D A A L D A H R N A --- (120)
A A+ +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
MK929790_CDS_0005 A A Q L E R E H D A A Y R A Y T -V -A Q -R D -L -L -K -A A Q D -E G S T P H ---D (166)
+ + A R D +A
AcrIF23 F V M Q Q K A L L A Q H R S A K A -A G -Q A D K -V -A -K I A A -E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;