3D Structure for MK524526_CDS_0084 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.72 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MK524526_CDS_0084 1 AcrIE6 0.74 View Alignment MK524526_CDS_0084 M S D R Y E K V L D V L T A E I H A L T R R V R E D V T S M I A C G D ----P -V -P G G I T E L L D A L D R Y E -W (60)
M+ VL+ +L +++ + + + + L
AcrIE6 M N N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L -S P M Y T -A -V M V T Y D L I G K Q L A S R R A -
MK524526_CDS_0084 -L -T -S A A R A V S ----E -N --H --D -E (87)
++
AcrIE6 E -L -I E I L E E Q Y P G H A -A D L S I K N L C P
MK524526_CDS_0084 2 AcrIE1 0.68 View Alignment MK524526_CDS_0084 M S D ---R Y E K V -------L ----------D V -L T A ----E -I -H -A -L T R -R V R E D V T S -(60)
M + L+ ++ +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L S L I V F -Q -A -E -T L S -D Q -A N E L A N Y
MK524526_CDS_0084 M I A C G D P V -P G G I T ---E L L D A L D R Y E W -L T -S -A A -R A V S E N -H ---D E (110)
G G + V +
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V -N -Q H -G I R V Y G D A I D R D V D
MK524526_CDS_0084 3 AcrIIC4 0.65 View Alignment MK524526_CDS_0084 M S -D -R -Y E K V L ---------------D -V ----L T A E I H A L T R R V R E D V T S M I -A -C -G (60)
M ++ L + +R+ +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E -P I K G L F K S A V E Q F S S A R D F F K N E -N -Y -S K
MK524526_CDS_0084 D P V P G G I T -E L L D A L D -R Y E -W -L -T S A A R -A -V S E N H --D E (102)
+ + + + A E
AcrIIC4 E L A E K F N K E A V N ----E -A V E -K -L -Q K A I D -L -A E K Q G I Q F
MK524526_CDS_0084 4 AcrIC3 0.60 View Alignment MK524526_CDS_0084 M S D -R Y E K -V ------L ---D ----V L T -------A E I H -A L T R -------R V R -E ----(60)
MS
AcrIC3 M S I Q V -T S T N G R T V N L E I E L G S V V A S S -G Q V K F M A D K T D R G -L E S R F L V P E A -G N -R R I E
MK524526_CDS_0084 --D V T S M I -A C G -D P V P -G G -I T -E L L D A L D R Y E W L T -S A A R A V S E N H D E (110)
+ + + + + Y L ++ +
AcrIC3 V A L T G R D L E -A A N -A L F S E -L A -A S V E A T N E M Y R E L -D A E R A Q I N K A L E G
MK524526_CDS_0084 5 AcrIF23 0.57 View Alignment MK524526_CDS_0084 M S D R ---Y -E -K -V ------------------------L ------------D --------(60)
M+ +
AcrIF23 M T N F Q T W -L -D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
MK524526_CDS_0084 ------------------V ----L -----T ----A E I H A L T R R V R E -D V T S M I A C G ---- (120)
AE + + I
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A E -K V Q Q M -N Q D Q A E M A C D P S G L L -T A A K F W I E N R N D S A
MK524526_CDS_0084 D -P -V -P G G I T -E L L D A L D R ------Y --E W L T S A A R A V S E N H ----D -E (170)
G + +L + A
AcrIF23 -Q -E -I A G F V -M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W -G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;