3D Structure for MK511011_CDS_0094 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.30 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MK511011_CDS_0094 1 AcrIIA21 0.71 View Alignment MK511011_CDS_0094 M S ---Q C W P -L ------Q ----G -M S A P Q K S V L I S L A D N S N D ---------D -G V -C W P S (60)
M SA V + L D + + D +
AcrIIA21 M D Y D N E N Y L I P K I L L Q D -D F Y S -S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G S I Y L N F K
MK511011_CDS_0094 V A R I A E R T C L S E R A V R N A L R W L E D A K V L V S H P R H ---G -R -S T W Y T V T P A S (111)
++ +A S + LE++ ++ G ++
AcrIIA21 L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G Y S L P Y K T Y I N E -V
MK511011_CDS_0094 2 AcrIA3 0.49 View Alignment MK511011_CDS_0094 M S --Q C -W P L ------Q G ---M S A P Q K S V L I S L A D -N S N D -D G V C W -P S V A ---R I A E -R (60)
MS + QK +L + D G P +
AcrIA3 M S F Y I M Y I K V K E M S E Q K -Q I S L R S K Q K E L L Q R F F E I A E V D E N G D L C I P L Y D S S G D L T -L F
MK511011_CDS_0094 T -C L S E R A V R N A L R W L E D A K -V -L V -S H P --R -H -G R S T W ----------Y -T -V -T P A S (120)
R L +K + + S
AcrIA3 K Q D S R K Y Q M Y A Y F R I L R L I K K Q I F -F I K -V K -K V K R D K K F L C M H S N V I D Q V K -S -V L E -S
MK511011_CDS_0094 3 AcrIE5 0.45 View Alignment MK511011_CDS_0094 M S Q C W P L Q G M S A P Q K S V L I S L A -D N S N D D G V C W P -S V A R I A E R T C L S E R A V R N A L R W L E D (60)
MS + ++ I++ T + + L
AcrIE5 M S -N ----D R N G ----I I ----N -----------Q ----I I D Y T G T D R D H A E R I Y E E L R A
MK511011_CDS_0094 A K V L V S H P R -H G R S T W --------Y -T -V T P A -S (94)
+ + V
AcrIE5 D D R I Y F D D S V G L D R Q G L L I R E D V D L M -A V A A E I E
MK511011_CDS_0094 4 AcrVA3 0.43 View Alignment MK511011_CDS_0094 M -S -Q C --W -P -L ---Q G ------------------------------------------(60)
M + W +
AcrVA3 M V G K S K I D W Q -S I D W T K T N A Q I A Q E C G R A Y N T V C K M R G K L G K S H Q G A K S P R K D K G I S R P Q
MK511011_CDS_0094 ---------------------------M S A -P Q K S V L I S L -A -D N S N D D G V --C W P S V A R (120)
+ + ++ D + ++ +
AcrVA3 P H L N R L E Y Q A L A T A K A K A S P K A G R F E T N T K A K T W T L ----K -S -P ---D N K T Y T F T N L M H
MK511011_CDS_0094 I A E R T C L S E R A V R -N A L -R -W L E -D -A -K V L V S H P R H --------G -R -----S -T -W --(180)
+ + + + +
AcrVA3 F V R T N P H L F D -P -D D V -V -W R T -K -S -N -G V E W C R A S S G L A L L A K -R K K A P L S W K -G -W R
MK511011_CDS_0094 -Y T V T P A -S (189)
++T
AcrVA3 L I S L T K D N K
MK511011_CDS_0094 5 AcrIF16 0.42 View Alignment MK511011_CDS_0094 M S Q C --W P L Q G -------------------------------------------------(60)
MS
AcrIF16 M S L S D K K E Q K E A Y L D A L R I A P L D R G V L K R I H A V N D N T L D K W L Y V A D R Y P T F R A C W E L W M F
MK511011_CDS_0094 ----------------------------------------M S A P Q K -S -V L I S L A D N S N D (120)
A
AcrIF16 Q R K R R V L I S R K L H V L I N R S T N R T I E A F E K T Y P P E E R V V G K S Y R D L V T -E K G E R S A N M Y I -
MK511011_CDS_0094 -D G V C W P S V A R I A E R T C -L S E R A V R N A L R W L E D A K V L V S H P R H -G -R S T W -Y T V T P A -S (179)
G + + ++ + + S
AcrIF16 I N G -E V V G A K D A S I L L G Y ---S S Y N T L Y A K M K R L G I Q P G D D I S H L K -P E K R -G R K K E C S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;