3D Structure for MK448873_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.59 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MK448873_CDS_0027 1 AcrIIA27 0.73 View Alignment MK448873_CDS_0027 M D K W Y T V Y A -S K --T ----D --R P E L G Y R L L A P S K D V A L D I V S K D P R V K -E --W E L ----(60)
M ++ + + Y++ A ++ A + + +
AcrIIA27 M K -T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T
MK448873_CDS_0027 --T -N I W V -------E N -E -E T R (83)
N E
AcrIIA27 A I -D N T H R R A W G R R Y L -R V E E -A
MK448873_CDS_0027 2 AcrIE2 0.66 View Alignment MK448873_CDS_0027 M D K W Y T V Y A S K T -D R ----P E L G Y R L -L -A -P S -K -D V -A L D I V S K ----D P R -V -----(60)
M Y + K+ D + A I+
AcrIE2 M -N T Y L I D P R K N N D N S G E R F T V D A V D I -T -A -A A -K S -A A Q Q I L G E E F E G L V -Y R E T G E S
MK448873_CDS_0027 K E W -E -L -T N I W V ------E -N --E -----E T R (93)
+ +
AcrIE2 N G S G -M -F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
MK448873_CDS_0027 3 AcrIC9 0.66 View Alignment MK448873_CDS_0027 M D ---K -W Y T V Y A S K T D R P E L G Y R L L -A P ---S K D V A L D I V S K D P R V K -E ------W ---(60)
M+ +Y + + Y D +D +++D +
AcrIC9 M E T K M T S F Y K I T -A Y -N S -Q A L Y F --W -G T D A D V D R Y V D W L N R D R E I -N V Y A A E A I P E A E
MK448873_CDS_0027 --E ---L -T -N I W V -E N E --------E T R (89)
+ E
AcrIC9 W A Q Y E G -R -D D V L -S G E E C G W D D F M S A E A
MK448873_CDS_0027 4 AcrIF9 0.56 View Alignment MK448873_CDS_0027 M D K W Y T V Y A S K T -D R P E L G Y R L L A P S K D V A L D I V S K D P R V K E W E L T N I W V E N E -------(60)
M Y + + G + A S A I+SK+ + I N
AcrIF9 M K A A Y I I K E V Q N I N S E R E G T Q I E A T S L S Q A K R I A S K E Q C F -H G T V M R I E T V N G L W L A Y K E
MK448873_CDS_0027 E -----T -R (69)
+
AcrIF9 D G K R W V D C Q
MK448873_CDS_0027 5 AcrIF5 0.55 View Alignment MK448873_CDS_0027 M D K -W Y T V Y A S K T -D -----------R -P E L G Y R L L -A P S K D V A L D I V S K D -P R V K ----(60)
M + + R+ +A+ +
AcrIF5 M S R P T V V T V T E T P R N P G S Y E V N V E R D G K M -V V G R A R A G S D P G A A A A K A M Q M A M E W G S P N Y
MK448873_CDS_0027 ----E W E L T N I W V E N -E E T R (80)
+ E+
AcrIF5 V I L G S N K V L A F I P E Q L R V K M
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;