3D Structure for MK448858_CDS_0083 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.37 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MK448858_CDS_0083 1 AcrIB1 0.83 View Alignment MK448858_CDS_0083 V R D Y I V F S L G E L L E G G --I T E E S L L P S F N A F K C -E R E K D L E V F L Q Q R A V T Y D K S N L G K T S (60)
L LL I L +F K D+E+FL +A+ +KS++ T
AcrIB1 M E S K N ---L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y
MK448858_CDS_0083 L I I D K E D Y E C N N R F S I M A F F T I G Q -T S L D I ----E -N L S I N K R K K L L G Q V -P G R D R L K S Y (120)
++ + I FTI + + + LS + KKL ++ +
AcrIB1 V V F S --E -----D N E I L G Y F T I A N R S L V I P K E N F -G I L S K T Q Q K K L G N S A A I L K N G D L M T
MK448858_CDS_0083 P A Y L I G Q L G R S D Y F -T S K D I D G D T I L N E C Y S E I R K V Q R I I G G R L L L L E C -R K H M F N K F Y E (180)
L+GQLG++ I G +L+ Y K+ +I + + LEC FY
AcrIB1 S S F L L G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q
MK448858_CDS_0083 K K G Y V K L S E E L D E H G L Y T L Y R K I R Y (205)
G L E GL +
AcrIB1 N F G F K M L E S L T S E E G L K V M I M E L -K
MK448858_CDS_0083 2 AcrVA5 0.55 View Alignment MK448858_CDS_0083 V R D Y I V F S L G E L L E G G I T E E S L L P S F N A F K C E R E K D L E V F L Q Q R A V T Y D K S N L G K T S L I I (60)
G + I
AcrVA5 M -K I E -L -S G G Y I C Y S I -------------------E -----------------------
MK448858_CDS_0083 D K E D Y E C N N R F S I M A F F T I G Q T S L D I E N L S I N K R K K L L G Q V P G R D R L K S Y P A Y L I G Q L G R (120)
I +
AcrVA5 --------------E -----------------------------------D E V T I D M V E V
MK448858_CDS_0083 S D Y F T S K D I D G D T I L N E C Y S E I R K V Q R I I G G R L L L L E C -R ------K H M F N K F Y E K K G Y V (180)
+ + G +++ +R +G + L FY
AcrVA5 T -T --K R Q G I G S Q L I D M V K D V A R E ----V G -L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E
MK448858_CDS_0083 K L S E E L D E H G L Y T L Y R K I R Y (200)
++ R
AcrVA5 Y D P D D -V --D G R L M -R -W -S
MK448858_CDS_0083 3 AcrVIA1_Lse 0.41 View Alignment MK448858_CDS_0083 V R -D -Y I V F S L G E L L E G G I T E E S L L P S -F ---N A F K C -E R E K D L E V F L Q Q R A V -T -Y D K S (60)
+ G + E + E + ++ + KS
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E -G L I T F L K K A E F E I Y S R E N Y S K Y N K W F -E -M W -K S
MK448858_CDS_0083 N L G K T S L -I I D K E D Y E C N N R F S I M A -F F -T I ---G -Q T S L D I E N L S I N K R K K L L G Q V P G R (120)
N S I ++ + L P
AcrVIA1_Lse P T S S L V -F W -K -------N -Y S F R C H L L F V I E K D -G E C L G I P A S V F E S V L Q I Y L A D -P F -
MK448858_CDS_0083 D R L K S ------------Y P -A -Y L -I G Q L G R S D Y F T -S K D ----I D G D ---------T I L (180)
+ + + +
AcrVIA1_Lse A P D T K E L F V E V C N L Y E C L A D -V -T V V E H F E A E E S A W H K L -T H N E T E V S K R V Y S K D D D E L -
MK448858_CDS_0083 -N E C Y -S E I R K -V Q R I I G G R L L L L E C R K H M F -N -K F -Y -E K K G Y V K L S E ----E -L -D E - (240)
+ + D
AcrVIA1_Lse L K Y I -P E F L D -T -I A T N K K ----S Q K -Y N Q I Q -G -K I -Q -E I N K -E I A T L Y E S -S -E D Y I
MK448858_CDS_0083 -----------------H G -L Y T L Y R K I R Y (270)
H L
AcrVIA1_Lse F T E Y V S N L Y R E S A K L E Q H -S K Q I L K E E -L N
MK448858_CDS_0083 4 AcrVA2 0.38 View Alignment MK448858_CDS_0083 V R -D ----Y I V ---F -S L ----G E -L L -E G G ----I ----T E E S ----L -L P S ----F N A (60)
+ + F + +
AcrVA2 M H H T I A R M N A F N K A F A N -A K D C Y K K -M Q A W H L L N K P K H A F F P M Q N T P A -L D N -G L A A L Y E
MK448858_CDS_0083 F -K C ----------E ------R -------E K D L E V F L Q Q R A V -------T -Y D K -S N L G K (120)
L+ + T +
AcrVA2 L R G G K E D A H I L S I L S R L Y L Y G -A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F -L N L P D W
MK448858_CDS_0083 -T S L -I I D K E D Y E -C -N ----N -R -F -S I -M A F F T I G Q T S L D I E N L S I N K R K -K L L G -Q V (180)
+ F+ I + + +L V
AcrVA2 C -V Y V D -I S S A Q -I -A T F D D G -V -A -K H -I K G F W A I Y D I V E M -N G I ---N H -D -V L D F -V
MK448858_CDS_0083 -P G -R D R L K S -Y P -A -Y L I G Q L G R S D Y F T S -K D I D G D T I L N E C Y S E I R K -V Q R -I -I G G R (240)
D Y+ G + +
AcrVA2 V -D T -D --T -D -D N -V Y V P Q P F I -L S ----S ----G ----Q S V A E V L D -Y G -A S -L -F D D
MK448858_CDS_0083 L L L L E C R K H M F N K F Y E K K G Y V K L -S E E L D ------------E ------------------(300)
+ + + ++
AcrVA2 ----D T S N T L I K G L L P Y L L W L C V A E P D I T Y K G L P V S R E E L T R P K H S I N K K T G A F V T P S E P
MK448858_CDS_0083 -------------------------------------------------------H -G -L (360)
AcrVA2 F I Y Q I G E R L G S E V R R Y Q S I I D G E Q K R N R P H T K R P H I R R G H W H G Y W Q G T G Q A K E F R V R -W Q
MK448858_CDS_0083 Y --T -L Y R K I R Y (372)
++
AcrVA2 P A V F V N S G R V S S
MK448858_CDS_0083 5 AcrVA4 0.38 View Alignment MK448858_CDS_0083 V R D Y I V F S L G E L L E G G I T E E S L L P S F N A F K C E R E K D L E V F -L -Q -Q R A V T Y D K S N L -G K T (60)
+ L+ ++ + ++ KT
AcrVA4 M -Y -E I K L N D T L I H Q T D D R V N A F V A Y R Y L L R R G D L P ----K -C -E -N I A R M Y Y D G K V I K T
MK448858_CDS_0083 S L I I D K E D Y E C N N R F S I M A F F T I G Q T S L D I E N -L S I N K R K K L -L G Q V P G R D R --------(120)
+ID+ S+ + + + +
AcrVA4 D -V I D H --------D S V H S D E Q ---A K V S N N D I I K ----M A -I S -E L G V N -N F K S L I K K Q
MK448858_CDS_0083 L -K S Y P A Y L I G ------Q L G R --S D Y F T S -K D ---I -D -G -D -------------T I L -N (180)
I S +
AcrVA4 -G Y P F S N G H I N S W F T D D P ---V K S K T ---M H N D E M Y L -V -V -Q A L I R A C I I K E I D L -Y T -
MK448858_CDS_0083 -E C -Y S E I R K V Q R I I -G G R L L L L E C -R ------K H M F N K F Y E K K G Y V -K ----------- (240)
Y+ I+ + ++
AcrVA4 E Q -L Y N I I K S L P Y D -K -R P N V V Y S D Q P L D P N N L D L S E P E L W A E Q V G E C M R Y A H N D Q P C F Y
MK448858_CDS_0083 L -S -E -E L -D -E --------------H G L Y ------T L Y R K I R Y (284)
+ R ++
AcrVA4 -I -G -S T -K -R -E L R V N Y I V P V I G V R D E I E R V M T L E E -V R N L H K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;