3D Structure for MK448704_CDS_0072 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MK448704_CDS_0072 1 AcrIIA34 0.55 View Alignment MK448704_CDS_0072 M K N E -A G K V --I ----V ---S -----------K -S -Q -------Y A N L I R H F -R -T -V -E (60)
MKN + + +
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S T Q K S I M R K I K A L -T -D -Q F E T M D D L I D S L N S Y A -D -T -H Y
MK448704_CDS_0072 D -F K N K -----F -N Q L T Y Y D T ----L S T E A -S -E Y K R -L -K V A E H E Y K -F R V S I Q K E L H G (120)
+ + S V E
AcrIIA34 -T W A I -T Y F Q L -A R I I I S F Q A S N N T T S E K -K I D L Q S G P -I E V -N G K L -K I -R V T V D E F M A
MK448704_CDS_0072 A E A E I T K D F Q S V L D Y I Q E Q L K V I V K (145)
L+ I +K +
AcrIIA34 D L -A N W ---E -H L E D I K K L A K E L -A
MK448704_CDS_0072 2 AcrIIA28 0.54 View Alignment MK448704_CDS_0072 M K N E A G K V I V S K S Q Y A N L I R H F R T V E D F K N K F -N Q L T Y Y D T L S T E A S E Y K -R L -K V A E H E (60)
M I +K Q L+ L + + + +
AcrIIA28 M -K ----T I F T K K Q T E E L L N D ------I ---S I ---E K Q K E L F N S M H D F R S Q -H A K E A R I
MK448704_CDS_0072 Y K F R V S I Q K E L H G A E A E I T K -D F Q -S V L D Y I -----Q -E Q -L K V I -V -K (109)
+ +K + + D + ++
AcrIIA28 P G W S D K Y N K L E K K M L S D F E -E V T -G I K Y D T L E S E L I -W D N L S N K F L Y N S
MK448704_CDS_0072 3 AcrIIC4 0.52 View Alignment MK448704_CDS_0072 M K N E A G K V I V S K S -Q Y A N L I R -H -F R T V E -D -F K N K F N Q L -T Y -Y D T L S T E A S E Y K R L K -(60)
MK S A+++ F + KN+ + ++ S +
AcrIIC4 M K I ------T -S S N -F A T I A T S E N F A K L S V -L P K N H R E P I K G -L F K S A V E Q F S S A R D F F K
MK448704_CDS_0072 V A E -H E Y K F R V S I Q K E L H G A E A E I T K D F Q S V L D Y I Q E Q L K V I V K (104)
E + + K + A E+ Q ++D + Q
AcrIIC4 N -E N Y ---S K E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I -Q -F
MK448704_CDS_0072 4 AcrIIA19 0.52 View Alignment MK448704_CDS_0072 M K N E A G K V I V S K S -Q Y A N L I R H F R T V ----E D F -K N K -F N Q L -T Y -Y D T -L -S T E -A S E Y (60)
MK V V +Y NL+ + + T +
AcrIIA19 M K L ---I V E V E E -T N Y K N L V N Y T K L T N E S H N I L V N R -L I S E Y I T -K P Y E L -R -L D L S E R -
MK448704_CDS_0072 K R L K V ---A E H E Y K F R V S I Q K E -L ---H ---------G -A E -------A E I T K D F Q S V L D (120)
+ + KE L + + + + S D
AcrIIA19 ---Y S N R D L I E F K F M L I E Y C K E A L Q D I K E L A N S D E A Y -E T D E A F E A V F R Q L F E E V I S N P D
MK448704_CDS_0072 Y I ----Q -E ----Q L K V -I V K (141)
+ L K
AcrIIA19 T V L K A F -H -S Y T S F L E -E N -K
MK448704_CDS_0072 5 AcrIIC5 0.49 View Alignment MK448704_CDS_0072 M K N E A G K V I V S K S Q Y -A -N L I R H F R T V E D F K N K F --------------------------(60)
M N + + + F T E
AcrIIC5 M N N S I K F H V S Y D ---G -T -A R A L F N T K E Q A E K Y C L V E E I N D E M N G Y K R K S W E E K L R E E N C
MK448704_CDS_0072 ---------------N Q L T Y Y D T L S T E A S E Y K R L K V A E H E -Y K F R V S I Q K E L H G -A E -A E (120)
+ L + E+S L ++ G +
AcrIIC5 A S V Q D W V E K N Y T S S Y S D L F N I C E I --E V S S A G Q L V K I D --N -T E V D D F V E N C Y G F -T L E D
MK448704_CDS_0072 I T K D F Q S V L D Y I Q E Q L K V I V K (141)
+F+ + Y+Q
AcrIIC5 D L E E F N K A K Q Y L Q K F Y A E C E N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;