3D Structure for MK097141_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.20 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MK097141_CDS_0027 1 AcrIIA8 0.73 View Alignment MK097141_CDS_0027 M Q T Y F E D Y Q D A L A T L K E G G F A V K L I K K G L P G G G Y D E N G D I Q A A E P D V D Y A G F G I T T G F S S (60)
M+ F + L+ +G + +S
AcrIIA8 M S I -F T -D ----------M I P A E L L I N E Y ---K K G Q S G A K H D N -Y V S V G R I M V A I Y K N N S
MK097141_CDS_0027 W H L K E G I -A Q A G D V K L I F A P E V M S G E Y I A F -Y N Q L -R N G G D R M Y A E V D G E L W R V V M G E E V (120)
++ + Q I + G +++D V +
AcrIIA8 F K N T G T V K Y Q D S T H S G I T M S K -------V -F ----I -D -G K E Y R I D I D T Q H Y E V Q D F D T S
MK097141_CDS_0027 K P T S T Q I I A K -L --H ---L R R (141)
+ L
AcrIIA8 ---G --R Q T T L I L K -R I D L Y G
MK097141_CDS_0027 2 AcrVIA3 0.43 View Alignment MK097141_CDS_0027 M Q T Y F E D Y Q D -A -L -A -T L -K -E G G F A -V K -L I K K G L P G G G Y D E N G D I Q A A E P D V D Y A G F (60)
M E G + + D
AcrVIA3 M F --K E ----F -L -E -K -C L -R -Y G N -L Y -I -L E E ---------T --------G -D ---R
MK097141_CDS_0027 G I T T G F S S W H L K E G I A Q A -G D -V K L I F A P E V M S G E Y I A F -Y N Q L R N G G D R M Y A E V D G E L W (120)
+ + L+F + D
AcrVIA3 ---K K V K R I S K R H -G K V -T -E A S V L L F D S G T K R T T ----I N E I Y L -N S Q G Y F I I R D Q K R L
MK097141_CDS_0027 R V V M G -E E V K -P T S T Q I I A K L H L R R (145)
+ +
AcrVIA3 K ---L E ----K -----------F -K
MK097141_CDS_0027 3 AcrIIA12 0.40 View Alignment MK097141_CDS_0027 M Q -T -Y F E D Y Q D A L A T L K E G G F A V K L I K K G L P G G G Y D E N G D I Q A A E P -D -V D Y A G F G I T T (60)
M+ T Y D +++ ++K + +
AcrIIA12 M S K T M Y K N D V I E L I K N A K T N N E E L L F T -S -V ---------------E R -N ----------
MK097141_CDS_0027 G F -S S W H L K E G I A Q A G D -V K -L I F A P E V M S G E Y -I A F Y -N Q L R N G G D -R -M -Y A E V D G E L (120)
S + Y + +L
AcrIIA12 --T ----R ----E A --A T -Q Y F R C P E K H V S D -A G V -Y Y G E D F ---E -F -D -G F E I F E D D L
MK097141_CDS_0027 W R V V M G E E V K P T S T Q I I A K L H L R R (144)
K L
AcrIIA12 I Y T R --S Y D K E -E --------L -N
MK097141_CDS_0027 4 AcrIIA7 0.39 View Alignment MK097141_CDS_0027 M Q T Y F E D Y Q D A L A T L K E G G F A V K L I K K G L P G G G Y D E N G D I Q A A E P D V D Y A G F G I T T G F S S (60)
M T AL +LK G +V K
AcrIIA7 M -T F G ----Q A L E S L K R -G H L V A R -K G -W -------------N ------------G ----
MK097141_CDS_0027 W H L K E G I A Q A G D V K L I F A P -E V M -----S G -E -Y ----I A F Y ----N Q L R N -G -----G -(120)
+ P + + +
AcrIIA7 ---------K -G M F I F M R P E D S L P T N M I V -N -Q -V K S L P E S F K R W V A N N H G D S E T D R I -K
MK097141_CDS_0027 D -R M Y A E V -D G E -L -W -R V V M -G E E ---V -K P T S T Q I I -A K L H L R R (166)
Y+ +V + + +
AcrIIA7 -F T A Y L C M K A A -D -G -T -I V N G W L A S Q T D M -L A N -D W V I ----V -E
MK097141_CDS_0027 5 AcrIC1 0.39 View Alignment MK097141_CDS_0027 M Q T Y F E D ---Y -Q D -------------A L A ---------T L -K -E G -----------G --(60)
M++ + T G
AcrIC1 M N N L K K T A I T -H D G V F A Y K N T E T V I G S V G R N D I V M A I D A T -H G E F N D K N F I I Y A D T N G N P
MK097141_CDS_0027 ------------------------------------------F A V K L I -K K G L P G G G Y D E (120)
++K
AcrIC1 I Y L G Y A Y L D D N N D A H I D L A V G A C N E D D D F D E K E I H E M I A E Q M E L A K R Y Q E ---L ------
MK097141_CDS_0027 N G D I Q A A E P D V -D Y A G F G I T -T G F S S W -H L K E G I -A Q A G D V K L I F A P E V M S G E Y I A F Y N Q (180)
D G + G + + +
AcrIC1 ----G ----D T V --------H -G T T R L A -----F D -D D G Y M T V R L D Q Q A -Y P D ---Y R P -
MK097141_CDS_0027 L R N G G -D -R -M Y -A E -V -D G E L W R V V M G E E V K P T S T Q I I A --K ---L -H L R -R (233)
A G V V + + R
AcrIC1 E N D D K H -I M W R A L A L T -A T G K E L E V F W L --V E D Y E D E E V N S W D F D I A D D W R E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;