3D Structure for MH494197_CDS_0647 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.94 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MH494197_CDS_0647 1 AcrIIA27 0.72 View Alignment MH494197_CDS_0647 M N L Y L V E -G S V Q V S K Q D G D G Y R F S H V E N F K Y V V K A D G Q Y D A E I Q V E E S F R K K N D I G K F E -(60)
M + + V+N Y V A +A + E + KF
AcrIIA27 M K T F N I I V S E S A N --L K -E H S -S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F -S S K W K F N M
MH494197_CDS_0647 --Y ---Q N -L Q ----F -T -V -W P S I -N D (88)
+
AcrIIA27 R D L T A I D -N T H R R A W -G R R -Y -L R V E E A
MH494197_CDS_0647 2 AcrIE2 0.60 View Alignment MH494197_CDS_0647 M N L Y L V E G S V Q V S K Q D G -D G Y R F S H V E N F K Y V V ---K -A -D G -Q -Y -D -A E -I Q V E E S F R (60)
MN YL++ + V A + E F
AcrIE2 M N T Y L I D P R K -N ---N D N -S G E R -F --T ---V D A V D I T -A -A A -K -S -A A -Q Q I L G E E F E
MH494197_CDS_0647 K K N D I --G K F -E -Y Q N ----------L -Q F ---T V W P S ---I N D (104)
G TV
AcrIE2 G L V Y R E T G E -S N G S G -M F Q A Y H H L H G T N R -T E T T V G Y P F H V M E L
MH494197_CDS_0647 3 AcrIC9 0.56 View Alignment MH494197_CDS_0647 M -N ----L Y -L V E G S V Q V S K Q D G D G Y R F S H V E N F -K Y V V K A D G Q Y D A E I Q V E E S F R K K N D (60)
M + + Y D++ + + +
AcrIC9 M E T K M T S F -Y K I T -A ------Y -------N -S -Q A L Y -F -W G T D A D V D R Y -V D W L N R D R E
MH494197_CDS_0647 I G K F E Y Q N --------------L Q F ---T V W -P S ---I N D (100)
I + W +
AcrIC9 I N V Y A A E A I P E A E W A Q Y E G R D D V L S G E E C G W D -D F M S A E A
MH494197_CDS_0647 4 AcrIF19 0.55 View Alignment MH494197_CDS_0647 M N -L Y L --V E G -S V Q -V S -K Q D G D G Y R F S H V E N F K -Y V V K -A D G Q -Y D A E -I Q V E E --S F (60)
M L + + + V D K + D ++ +
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y D E -Y G F E Y --S V -K L K I -S V R D -Y R G -I D V S A F N A F P E W
MH494197_CDS_0647 R K K -N D I ---G K ----F ---E -Y Q N -L Q -F T V W P S ----I --N -D (105)
+ + + P
AcrIF19 E D T L R M R D R V M -S V E E I E N A -M I S R Y K S L -F I A P -P D C T Y E F -D I
MH494197_CDS_0647 5 AcrIA 0.54 View Alignment MH494197_CDS_0647 M N ------------------L Y L V E G S ----------V -Q -V S K Q D G D G Y R ---F S -H -V (60)
M +E D F
AcrIA M V E V K Q K T L S Y K L K I N T R D Y S I T L E A E L K A V I N V K G N D L -V -Y -E D ---K -Q Q K F V G -Y -
MH494197_CDS_0647 -E N -F -K Y V V K A -D G Q Y D A E I Q V E E S F R K K N D I G K F E -Y -Q N -L Q F -T V W P S I -N D (116)
E A+ + E F K G + I +
AcrIA I E -T -I S -S Y E T K N A K E N A D E I L N E R F E K Y A N -G L K -V -L E -Q T A -E A I N A E I E I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;