3D Structure for MGV-GENOME-4435691_CDS_0225 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.40 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-4435691_CDS_0225 1 AcrIIA21 0.72 View Alignment MGV-GENOME-4435691_CDS_0225 M K D -Y K H S P F D E E I L D A M I K Y N I D K -P T K E Q F T L V D A R I I S L V H S Y E Y -S --------G -(60)
M +L + ++ D+ + +++
AcrIIA21 M D Y D N E N Y L I P K I L L Q ----D ----D -F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G
MGV-GENOME-4435691_CDS_0225 Q -T F F A S N K Y L A E K C F T T Q A T I Q K S I N K L L A H G F I N K K V F -C I E -G R K Q R I L T Y N E Q A V E (120)
+ LA + T ++L I + TY +
AcrIIA21 S I Y L N F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G Y S L P Y K -T Y ----I -
MGV-GENOME-4435691_CDS_0225 E F -K L A A P H A P (131)
AcrIIA21 --N ---E ---V
MGV-GENOME-4435691_CDS_0225 2 AcrIA3 0.52 View Alignment MGV-GENOME-4435691_CDS_0225 M K D Y K H S P F D E E I L D A M I K Y N I D K P T -K -E Q F T L V D A R I I S L V H S Y E Y -S -G -Q T F -F A S (60)
M Y E + + +++
AcrIA3 M S F Y I M Y I K V K E M S E Q K ---------Q -I -S L R S K Q K E L L Q R F F E I A E V D E N G D L -C I P L
MGV-GENOME-4435691_CDS_0225 N -K ---Y L A E K C -F ---T -T Q A T I Q K S I N K L L A H G F I N K K V F C I E G R K Q R I L T Y N E Q A V E (120)
L Q + I +L+ + KV + + L ++++
AcrIA3 -Y D S S G D L -T L F K Q D S R -K Y Q M Y A Y F R I L R L I K K Q I F F I K V K K V K R D -K K F L C M H S N V I D
MGV-GENOME-4435691_CDS_0225 E F K L -A -A P H A P (132)
K
AcrIA3 Q V K S V -L --E -S
MGV-GENOME-4435691_CDS_0225 3 AcrIE5 0.46 View Alignment MGV-GENOME-4435691_CDS_0225 M K D Y K H S P F D E E I L D A M I K Y N I D K P T K E Q F T L V D A R I I S L V H S Y E Y S G Q T F F A S N K Y L A E (60)
M I+ I Y+
AcrIE5 M S --N ---D R N G I I N Q I I D Y T ------------------------------G --------
MGV-GENOME-4435691_CDS_0225 K C F T T Q A T I Q K S I N K L L A H G F I N K K V F C I E G R K Q R I -L T Y N E Q A V E E F K L A A P H -A P (117)
T + + L A I +Q L + + +
AcrIE5 ---T D R D H A E R I Y E E L R A D D R I Y F D D S V -G L D R Q G -L L I R E D V D L M A V A A E ---I -E
MGV-GENOME-4435691_CDS_0225 4 AcrVA3 0.41 View Alignment MGV-GENOME-4435691_CDS_0225 M K D -Y -K ---H ---S P ---F -------D E E I L D -A -M I K Y N I D K P T K -E Q ----------(60)
M + + K +
AcrVA3 M V G K S K I D W Q S I D W T K T N A Q I A Q E C G R A Y N T V C K -M R G K L G K S H Q G A K S P R K D K G I S R P Q
MGV-GENOME-4435691_CDS_0225 -----F ------------T L -V D A R I I S L V H S Y E Y S G Q T F -F -A S N K Y L A E --K C F -T T Q (120)
+ + + T+ F +
AcrVA3 P H L N R L E Y Q A L A T A K A K A S P K A G R F -E T N -T ---K A K -T W T L K S P ---D N K T Y T -F T N L -
MGV-GENOME-4435691_CDS_0225 -A -T I Q K -S I N -K L L A H G -F I -N K K V F C I E G R K Q R I L T ---Y N E Q A ----V -E E F ----- (180)
+ + + + +
AcrVA3 M -H -F V R T N -P H L -F D P D D -V V W R T K -S ---N G V E -W C R A S S G L A L L A K R -K K A P L S W K G
MGV-GENOME-4435691_CDS_0225 K ---L A A P H A P (191)
+
AcrVA3 W R L I S L T K D N K
MGV-GENOME-4435691_CDS_0225 5 AcrVA2 0.40 View Alignment MGV-GENOME-4435691_CDS_0225 M K -D Y -K ---H -S P ----F ------------------------------D E E I L D A M I K Y (60)
M+ + + + L A
AcrVA2 M H H T I A R M N A -F N -K A F A -N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L
MGV-GENOME-4435691_CDS_0225 N I D K P T K E Q ----F ----------------------------------------------(120)
K
AcrVA2 R G G K -E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P D W C V
MGV-GENOME-4435691_CDS_0225 ------------------------------------------------------------ (180)
AcrVA2 Y V D I S S A Q I A T F D D G V A K H I K G F W A I Y D I V E M N G I N H D V L D F V V D T D T D D N V Y V P Q P F I L
MGV-GENOME-4435691_CDS_0225 ------------------------------------------------T L V D -A R I I S L V (240)
+ ++
AcrVA2 S S G Q S V A E V L D Y G A S L F D D D T S N T L I K G L L P Y L L W L C V A E P D I T Y K G L P V S -R E -E L T R P
MGV-GENOME-4435691_CDS_0225 H S Y -E Y -S G Q T F F A S N K Y L A E K C F -T ----T Q A T I Q K S I N K L L A ------H -G F --I N K -(300)
+ F + + Q I I +
AcrVA2 K H S I N K K -T G A F V T P S E P F I Y Q I G E -R L G S E V R R Y Q S I I D G E Q K R N R P H T -K R -P H I R R G
MGV-GENOME-4435691_CDS_0225 ---K V F C I E G R K Q R I L T -Y N E Q A V E E F K L -A -A -P -H A P (339)
+ G + +
AcrVA2 H W H G Y W Q G T G Q A K E F R V R W Q P A V F V ----N -S -G -R V S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;