3D Structure for MGV-GENOME-4433212_CDS_0058 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 83.55 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-4433212_CDS_0058 1 AcrIF15 0.84 View Alignment MGV-GENOME-4433212_CDS_0058 M T K R -E Q R E F A K E L I E K C I V A I N E L P N C --S -N G -------H S D V --------Y D K A T I E (60)
MT E + +E + + D +++ +
AcrIF15 M T T I T I A Y E V S N D K V E T I K T M V E S Q Q I H N V -N F N G E E F T I E R G D -F T S I D K D E A E H V K L L
MGV-GENOME-4433212_CDS_0058 R V L R N V I -D -N (71)
+ +I +
AcrIF15 N K I Q D I I H G Y S
MGV-GENOME-4433212_CDS_0058 2 AcrIE6 0.82 View Alignment MGV-GENOME-4433212_CDS_0058 M T K -R E -Q R E F A K E L I E K C I V A I N E -L P N C S N G ----H S D V ------------Y -D K A T I (60)
M+ E E + E + + + LP+ +A +
AcrIE6 M N N D T E V -L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V -M V T Y D L I G K Q L A -S R R A E L
MGV-GENOME-4433212_CDS_0058 E R V ----L -----R -N V -I ----D -N (86)
+ +
AcrIE6 I E I L E E Q -Y P G H A -A D L S -I K N L -C P
MGV-GENOME-4433212_CDS_0058 3 AcrIF2 0.81 View Alignment MGV-GENOME-4433212_CDS_0058 M -T --K R E Q R ---E -------F A -----K ------E -----------------------L (60)
M ++++
AcrIF2 M I A Q Q H K D T V A A C -E A A E A I A I -A K D Q V -W D G E G Y T K Y T F D D N S V L I Q S G T T Q Y A M D A D D
MGV-GENOME-4433212_CDS_0058 I E -K C I V A I N E L P N C S N G H S D V Y D K A T I E R V L R N V I D N (98)
+ + L + IER+L +V +
AcrIF2 A -D S I K G Y A D W L D D ----E A R S A E A S E I E R L L E S V E E E
MGV-GENOME-4433212_CDS_0058 4 AcrIIA34 0.81 View Alignment MGV-GENOME-4433212_CDS_0058 M -T K R ----E Q -R -E ----------F A --------------------K E -------L ---(60)
M + +
AcrIIA34 M K N I A N E I K T -I -R Y A F E D G R S T Q K S I M R K I K A L T D Q F E T M D D L I D S L N S Y A D T H Y T W A I
MGV-GENOME-4433212_CDS_0058 -I E K C I V A I N E L P N -C S --N G --------------H -S -D V Y D K A T I E ---------R V L (120)
+ +I + +
AcrIIA34 T Y F Q L A R I I I S F Q A S N N T T -S E K K I D L Q S G P I E V N G K L K I R V T V D E F M A D L A N W E H L E D I
MGV-GENOME-4433212_CDS_0058 R N V I -D -N (128)
+ ++ +
AcrIIA34 K K L A K E L A
MGV-GENOME-4433212_CDS_0058 5 AcrIF2-IC2 0.81 View Alignment MGV-GENOME-4433212_CDS_0058 M T K --R -E ---Q R E F -A ---------K E -L I E ----------------------------(60)
M Q+ +
AcrIF2-IC2 M A T K T A Q M I A Q Q H K -D T V A A C E A A E A I A I A K -D Q V W D G E G Y T K Y T F D D N S V L I Q S G T T Q Y
MGV-GENOME-4433212_CDS_0058 ----K C I V A I N E L P N C S -N -G H S D V Y D K A T I E R V L R N V I D N (101)
+ I + IER+L +V +
AcrIF2-IC2 A M D A D D A D S I K G Y A D W L D -D -E A R S A E A S E I E R L L E S V E E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;