3D Structure for MGV-GENOME-4045172_CDS_0015 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.21 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-4045172_CDS_0015 1 AcrIE1 0.74 View Alignment MGV-GENOME-4045172_CDS_0015 M T D N ----I I S I Q ----D I K -T D L E K T R H N L S S L S F E E -V T -A -L T M E Q L S N N L I I I A D T (60)
M + + + + S+ + + E+LS ++ +A
AcrIE1 M E K K L S D A Q V A L V A A W R K -Y P D L -R E S L E E A A S I L -S -L I -V -F -Q A E T L S D Q A N E L A N Y
MGV-GENOME-4045172_CDS_0015 L -E K T I D V V K T L K A N D I A I Q E Q L I Q L G D ----K V E I -L E N D M E V L -L (107)
+ ++ + + N + + + + +
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-4045172_CDS_0015 2 AcrIC3 0.63 View Alignment MGV-GENOME-4045172_CDS_0015 M T D N -I I -S --I ---Q ----D I K T D L E K T R H N L S S -L S F E -E V T A L T M E Q L S -N N L -I --(60)
M+ + + + + + + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V -K F M A D K -T D R G L E S R F L V P E A G N R R -I E V A
MGV-GENOME-4045172_CDS_0015 I I A D T L E K T I D V V K T L K A N D I A I Q E Q L I Q L G D K V E I L E N D M E V L L (105)
+ LE + L A+ A +E L + E
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E --G
MGV-GENOME-4045172_CDS_0015 3 AcrIE6 0.57 View Alignment MGV-GENOME-4045172_CDS_0015 M T D N I I S I Q D I K T D L E K T R H N L -S S L S F E E V T A L T M E Q L S N N L I I I A D T L -E K T -I D V V K (60)
M+ + E L L E+ + K
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S -------P M Y T ---A V -M V T -Y D L I G K
MGV-GENOME-4045172_CDS_0015 T L K A N D I A I Q E Q L I -Q -L -G D K V E I L E N D M -E V L -L (96)
+L + + E L ++ L + L
AcrIE6 Q L A S R R A E L I E I L E E -Q -Y P G H A A D L -S I -K -N L C P
MGV-GENOME-4045172_CDS_0015 4 AcrIIA11 0.53 View Alignment MGV-GENOME-4045172_CDS_0015 M T -D N I I -S I ------Q ----------------D --------------I K T D L E K -----(60)
M ++ D I L
AcrIIA11 M A D M T L R Q F C E R Y R K G -D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S D Y
MGV-GENOME-4045172_CDS_0015 T R H N L S S -------L -S --------F E E --------------------------V T A ---(120)
N FE +
AcrIIA11 I L D N Y R V W F K N N C P -M V G P L Y D D V R F E -P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F -T A R
MGV-GENOME-4045172_CDS_0015 -----L -T M -E Q L S N N L I -I I A -D -T L -E K T I D V V --K T L K A N D -I A -I -Q E Q L -I Q L G D (180)
+ + + + ++ E +
AcrIIA11 N D Y E N E C G -F -N N V R E V R Q F -I N -G -W E D E L K N -E E F Y K A R E K K R Q -E -M E E A -N N K F A E
MGV-GENOME-4045172_CDS_0015 K V E I L E N D M E V -L -L (195)
++
AcrIIA11 I M Q R A D E I L W N L K E D
MGV-GENOME-4045172_CDS_0015 5 AcrIF23 0.52 View Alignment MGV-GENOME-4045172_CDS_0015 M T D --N -I I ---S -I Q ---------------D ---------I K -----------------(60)
MT + + +Q
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R -A S L S P R G I D A R A V A K T F
MGV-GENOME-4045172_CDS_0015 --------T ----D L E K T R H N L S S L S F E E ----V T -A L T M E Q L S N N L I I I A D T L E K T I D V (120)
+EK R + L + + +++ ++
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M -N Q D Q A E M -A -C D P S G L L T A A K F W I E N R N D S A Q E
MGV-GENOME-4045172_CDS_0015 V K T L K A N D I A I Q E Q L ---------I Q L -G -D K V E I L E N D M E V -L -L (166)
+ + A+ Q + +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A K I A A E Y N A L T -A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;