3D Structure for MGV-GENOME-3908141_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.43 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-3908141_CDS_0008 1 AcrIE6 0.73 View Alignment MGV-GENOME-3908141_CDS_0008 M T K K T W N V R D Q P E E A L R T K V E S L Y K E I E K S Y K L L K K L S -K L ---E -D -A Q A -M -M D N I W S (60)
M+ + L + + ++ L L + D I
AcrIE6 M N -N D ---T E V ----L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A -V M -V T -Y -D L I G K
MGV-GENOME-3908141_CDS_0008 M -K A -L -A N D I Q -L E L L R R E ----Y N N --G --T -T S (96)
++ L +
AcrIE6 Q L A -S -R R A E L -I E I L E E Q Y P G H A A -D L S -I K N L C P
MGV-GENOME-3908141_CDS_0008 2 AcrIE1 0.63 View Alignment MGV-GENOME-3908141_CDS_0008 M T K K ---T W -N V R D -Q ----------P E ----E -A -L R -T ----K V E S L Y K E I E K S Y K L L (60)
M KK + L +E+L + +
AcrIE1 M E K K L S D A Q V -A L -V A A W R K Y P D L R E S L E E A A -S -I L -S -L I V F Q A E T L S D Q A N E L A N Y I
MGV-GENOME-3908141_CDS_0008 K K L -S K L E D A Q A M M D N I W S M K A L A N D I Q L E L L R R E ----Y N N ---G -T T S (110)
++ LE+A NI M+A ++ E+ +
AcrIE1 R R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D -R D V D
MGV-GENOME-3908141_CDS_0008 3 AcrIIC4 0.62 View Alignment MGV-GENOME-3908141_CDS_0008 M T -K K -T -W N ------V ---R D -Q ----P E E A L R T K V E S L Y K E I E K S Y K L L K K L -S K L E D (60)
M + + E ++ S+ K E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S -V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-3908141_CDS_0008 A Q -A M -M D N I W S M -K A -L A N -D -I Q L E L L R R E Y N N G T T S (99)
A + A ++ +G +
AcrIIC4 A E K -F N K E ---A -V N -E -A V E -K -L Q K A I D L A E K Q G I Q F
MGV-GENOME-3908141_CDS_0008 4 AcrIF23 0.59 View Alignment MGV-GENOME-3908141_CDS_0008 M T K -K -T -W N ----V R D ------------------Q ------------------------(60)
MT
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y -N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-3908141_CDS_0008 ----------------------P E E A L R ---T K V E S -L Y K E -I E K S Y K L L K K L S -K L E D A (120)
K + A
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L -L T A A K F W I E N -R -N D S A
MGV-GENOME-3908141_CDS_0008 Q A M M D N I W S M K A -L A N -D I Q -L E L L R R E -------------Y N N G T T --S (170)
Q + + L +
AcrIF23 Q E I A G F V M Q Q -K A L -L A -Q H R S A K A -A -G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-3908141_CDS_0008 5 AcrIC3 0.56 View Alignment MGV-GENOME-3908141_CDS_0008 M T K K T W -N ------V R D --Q -------------P E E A L R -T K V E ---S L Y K E I E K S Y K -L (60)
M+ + + + +E + + +
AcrIC3 M S I Q V T S T N G R T V N L --E I E L G S V V A S S G Q V K F M A D K T D R G -L E S R F L V P E A G N R R I E V A
MGV-GENOME-3908141_CDS_0008 L -K K -L S K -L -E D A -Q -A M -M D N I W S M K A L A N D I Q L E L L R R E Y N N --G T T S (111)
A + + N+ EL +
AcrIC3 -L T -G -R D L -E A -A N -A -L F -S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;