3D Structure for MGV-GENOME-3903624_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.81 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-3903624_CDS_0009 1 AcrIE6 0.74 View Alignment MGV-GENOME-3903624_CDS_0009 M H K T W N V R D Q T K E A L E I L L E R K Y K E I D S N Y K M L R K V S ----N I E D A K R L I D E I W Q M -K N F (60)
M E+LE + +D L + + D I +
AcrIE6 M N --N -D ----T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S -
MGV-GENOME-3903624_CDS_0009 -A N T I E -I E L M R R -K -----Y K N --G --T -T -S (93)
+ L
AcrIE6 R R A E L -I E I L E E -Q -Y P G H A A -D L S -I K -N L C P
MGV-GENOME-3903624_CDS_0009 2 AcrIE1 0.62 View Alignment MGV-GENOME-3903624_CDS_0009 M H K -T W N V R D ---Q ----------T K ----E -A -L -E -I -L L -E ----R K Y K E I D S N Y K M (60)
M K + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A -S -I -L -S -L I -V -F Q A E T L S D Q A N E L A N Y
MGV-GENOME-3903624_CDS_0009 L R K -V -S N I E D A K R L I D E I W Q M K N F A N T I E I E L M R R K ----Y K N --G -T T S (111)
+R +E+A + I M+ + E+ +
AcrIE1 I R -R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D -R D V D
MGV-GENOME-3903624_CDS_0009 3 AcrIIC4 0.62 View Alignment MGV-GENOME-3903624_CDS_0009 M H -K T -W N V R D -----Q ---------T K E A L E I L L E R K Y K E I D S N Y K M L R K V -S N I E D A K (60)
M+ + + +E + L S + + E A
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
MGV-GENOME-3903624_CDS_0009 R L -I D E I W Q -M -K N F -A N T I E I -E L M R R K Y K N G T T S (96)
+ + + + K+G +
AcrIIC4 K F N K E ----A -V N E -A V E K -L Q K -A I D L A E K Q G I Q F
MGV-GENOME-3903624_CDS_0009 4 AcrIF23 0.58 View Alignment MGV-GENOME-3903624_CDS_0009 M H K --T W N V -R D --------------------------Q ---------------------(60)
M TW D +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-3903624_CDS_0009 --------------------T K E A L E ---I -L L E R -K Y K E -I D S -N Y K M L R K V S -N I E D A (120)
+ + + + ++ ++
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E -M A C D -P S G L -L T A A K F W I E N R N D S A Q E I
MGV-GENOME-3903624_CDS_0009 K R L I D E I W Q M K N F A N T I E I E L -M R R K --------Y K N G T T --S (163)
+ ++ + +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I A A E Y N A L T A R W G F
MGV-GENOME-3903624_CDS_0009 5 AcrIF25 0.55 View Alignment MGV-GENOME-3903624_CDS_0009 M H K -T W N V R D ---------Q -------------------------T K E A ---L E I L L E --(60)
M + +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
MGV-GENOME-3903624_CDS_0009 ---------R ----K ----Y K E I D S N Y K M L R K V S N I E D A K R L I D E -I W Q M K N F A N T I E I E (120)
I ++ ++ +D + + + +
AcrIF25 A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D ---D A T R L D -A A L W A R E G Y Q L L S S G
MGV-GENOME-3903624_CDS_0009 L ---M -R -R K ---------------------------------Y K N G T -T -S (172)
L G
AcrIF25 L P D S Y S -G -A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;