3D Structure for MGV-GENOME-3901587_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.11 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-3901587_CDS_0005 1 AcrIE6 0.71 View Alignment MGV-GENOME-3901587_CDS_0005 M I T K S W N V R D Q -T E -K D L A E L L E K K Y K E I E N D Y K L L R K I -S K I E T A K K M I D E -I W Q C -K S (60)
M + + + E E+ L + + D Q S
AcrIE6 M N -N D ---T E -V L -E -Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q -L A S
MGV-GENOME-3901587_CDS_0005 F A N A I E L E L I R R G --F Y N ---G --T T -S (88)
+ L +
AcrIE6 R R A E L I E I L E E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-3901587_CDS_0005 2 AcrIE1 0.64 View Alignment MGV-GENOME-3901587_CDS_0005 M I ---T K -S W N V R D Q -------------T -E -K -D -L -A E L ----L -E -K -K -Y K E -I E N (60)
M + + L +
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S L E E A -A -S -I -L -S L I V F Q -A -E -T -L S D -Q A N -
MGV-GENOME-3901587_CDS_0005 -D Y K L L R K -I S K I E T A K K M I D E I W Q C K S F A N A I E L E L I R R G ----F -Y N ---G -T T S (117)
+R + +E A I + + E+ +G
AcrIE1 E L A N Y I R -R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G D -A I D -R D V D
MGV-GENOME-3901587_CDS_0005 3 AcrIIC4 0.58 View Alignment MGV-GENOME-3901587_CDS_0005 M I -T K -S W N V R D -Q -------------T -E K D L A E L L E K K Y K E I E N D Y K L L R K -I S K I E T (60)
M T + + + + L + + E
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N -H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-3901587_CDS_0005 A K K M -I D E I W Q C K S F A N A I E L E L I R R G F Y N G T T S (94)
A K + + +I +G +
AcrIIC4 A E K F N K E ---A V N E A V E K -L Q K A I D L A E K Q G I Q F
MGV-GENOME-3901587_CDS_0005 4 AcrIF23 0.56 View Alignment MGV-GENOME-3901587_CDS_0005 M I -T K -S W N ---V --------R D ----Q --------------------------------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I -D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-3901587_CDS_0005 ------T -------E K D L A E L L E K K ----Y K E I E N D Y K L L R K -I S -K I E T A K K M I D E I W Q (120)
+ E D L + IE+ + EI
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
MGV-GENOME-3901587_CDS_0005 C K S F A N A I E L E L I -R ---R --G -------F -Y N -G T --T --S (162)
A+ +
AcrIF23 F V M Q Q K A L L A Q H -R S A K A -A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-3901587_CDS_0005 5 AcrIIA28 0.55 View Alignment MGV-GENOME-3901587_CDS_0005 M I T -K -S ---W N V -R -D -Q T E -K D -L A E L L E K -K Y K E I E N D Y K L L R K I S K I ----E T A K K (60)
M T + EL + K +R KK
AcrIIA28 M K T I F T K K Q T E E L L -N -D -I S I E -K Q K E L F N -S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K
MGV-GENOME-3901587_CDS_0005 M I D E I W Q C K -S F A N A I E L E L I R R G -F Y N -G -T --T S (96)
M+ + +E ELI + S
AcrIIA28 M L S D F E E V T G I K Y D T L E S E L I W -D N -L S N K F L Y N -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;