3D Structure for MGV-GENOME-0380180_CDS_0242 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.33 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0380180_CDS_0242 1 AcrIB1 0.85 View Alignment MGV-GENOME-0380180_CDS_0242 L N -D A L A S ------------F ----R C ---D -L D K D I E T F L H E K A L N F I E R G W C S V Y L I V (60)
L R DIE FLHEKA+ F S Y++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
MGV-GENOME-0380180_CDS_0242 D E A E F D N G H I K V E A Y F T L S H K S -L I P D ----A -A S K N S I K A T S ----G -F K -T A Q S I H F V (120)
E + YFT+ +S +IP +SK++ K K
AcrIB1 S E ------D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A -I L K N G D L M T S S F
MGV-GENOME-0380180_CDS_0242 L I G Q L G K Y K Y I E N E H H I -V S S P I T G K Q I L D Y A F E V I H D A S N L I P C R C A L V E C S A D E N I Q N (180)
L+GQLGK + ITG+ +L A ++ + LI + + +EC+ + + +
AcrIB1 L L G Q L G K N Y S D -D ----I -E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S
MGV-GENOME-0380180_CDS_0242 F Y R N N G F K Y F Q Y ---D -G D H H Q F Y R E I K (208)
FY N GFK + E+K
AcrIB1 F Y Q N F G F K M L E S L T S -E E G L K V M I M E L K
MGV-GENOME-0380180_CDS_0242 2 AcrVA5 0.57 View Alignment MGV-GENOME-0380180_CDS_0242 L N D A L A S F R C D L D K D I E T F L H E K A L N F I E R G W C S V Y L I V D E A E F D N G H I K V E A Y F T L S H K (60)
+ Y S
AcrVA5 M K --I E -L ------------------------------------------S G G Y I C Y S I -
MGV-GENOME-0380180_CDS_0242 S L I P D A A S K N S I K A T S G F K T A Q S I H F V L I G Q L G K Y K Y I E N E H H I V S S P I T G K Q I L D Y A F E (120)
V I + G Q++D + +
AcrVA5 ------E ----------------E D E V T I D M V E V T ---------T K R Q G I G S Q L I D M V K D
MGV-GENOME-0380180_CDS_0242 V I H D A S N L -I P C R C A L V E C S ---A ---D E N I Q N F Y R N N G F K Y F Q Y D G D H H Q F Y R E I K (177)
V+++ + + E + FY +N F Y D D + R
AcrVA5 V A R E ----V --G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M -R W -S
MGV-GENOME-0380180_CDS_0242 3 AcrVIA1_Lse 0.38 View Alignment MGV-GENOME-0380180_CDS_0242 L N D A ---L A S ----F R C -----D -L D K D I E T F L H E K A L N F I E ------------R ----G (60)
L + + TFL+
AcrVIA1_Lse M I Y Y I K D L K -V K G K I F E N L M N K -E A V E G L I T F L K K A E F E I Y S R E N Y S K Y N K W F E -M W K S P
MGV-GENOME-0380180_CDS_0242 W -C S V Y L I V D E A E F D N G H I K V E -A Y F T -L S H --K -S L I P D A A S K N S I K A T S G ---F K T A Q (120)
S+ + + IP + + + + +
AcrVIA1_Lse -T S S L V F W -K ------N -Y S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D P F -A P D T
MGV-GENOME-0380180_CDS_0242 S ------------I H -F -V -L I G Q L G K Y K Y I E N E H -H I V ---S S -P -----I ----T G K -(180)
+ ++ +
AcrVIA1_Lse K E L F V E V C N L Y E C L A D -V -T V V E H F E A -E E ---S A W --H K L T H N E -T E V S K R V Y S K D D -D
MGV-GENOME-0380180_CDS_0242 Q I L -D Y A F E V I H D A S N -L I P C R C A --L V E C S -A ----D E N I Q N F Y R N ------------N (240)
+ Y+ E + + I + Y +
AcrVIA1_Lse E L -L K Y I P E F L D T I -A T -N K K S Q -K Y N Q I Q -G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L
MGV-GENOME-0380180_CDS_0242 G F -K Y F Q Y D -G D -H -H Q F Y R E I K (263)
E+
AcrVIA1_Lse -Y R -E S A K L E Q -H S K Q I L K E E L N
MGV-GENOME-0380180_CDS_0242 4 AcrIC11 0.38 View Alignment MGV-GENOME-0380180_CDS_0242 L N D -A -L A S F R C D L D K D I E T F L H E K A L N F I E -R G W C S V Y L I -V D -E A E F D N G H I K V E A Y F (60)
N + + FL + RG V + + Y
AcrIC11 M N K E T Q I T A S A V V G E D K R L E F L S K H F G V R F A R R G E A L V F A W L L R L A K -V -P I E W T R L Q Y Y
MGV-GENOME-0380180_CDS_0242 T L S H K S -L I P D A A S K N S I K A T S G F K T -A Q S I H F V L I G Q L G K ------Y K Y -I E N E H H I V -(120)
TLS + ++ S + ++ +
AcrIC11 T L S N S G F Y L A P R E ----L R -I S E C -E L -S A D A V G I V A T M L T L R Q L A H E S A A C V E A -D --S
MGV-GENOME-0380180_CDS_0242 --S S ---P -I T G K Q I L -D -Y A F E V I H D A S N L I P C R C A L V -E C S A D E N I Q N F Y R N N G F K Y F (180)
+
AcrIC11 T Y P A A K L A V T A S V K F -A -Q Q -Y H H L A A ------------Y -S V K ----------H -----
MGV-GENOME-0380180_CDS_0242 Q Y D G D H H Q F Y R E I K (194)
+ + YR I
AcrIC11 ---A E S I N I Y R A I D
MGV-GENOME-0380180_CDS_0242 5 AcrIF14 0.38 View Alignment MGV-GENOME-0380180_CDS_0242 L N D A L A S F R C D L D K D I E T F L H E K A L N F I E R G W C S V Y -L I V D E A E F D N G H I K -V E A Y F T L S (60)
I + +
AcrIF14 M K --------------------------------K I E M I E I S Q ----N R Q -N L T -A ---F
MGV-GENOME-0380180_CDS_0242 H K S L I P D A A S K N S I K A T S G F K T A Q S I H F V L I G Q L G K Y K Y I E N -E H H I V S ---S ----P --(120)
+I + S
AcrIF14 --------------------L --H I S E I K A I N A K L A -----D G ---V D V D K K S F D E I -C S
MGV-GENOME-0380180_CDS_0242 ------I T G -K -Q I L -D Y A F -E V I H D A S N L I P C R C A -L V E C -S A D E N I Q N F Y R N N -G F K Y (180)
E+ + + +E
AcrIF14 I V L E Q Y Q A -K -Q I S -N K Q -A S E I F E T L A K A N -K S F -K -I E K F R C S -----H ----G -Y N E
MGV-GENOME-0380180_CDS_0242 -F Q Y D G D -----------H ----H Q F -Y R --E -I K (215)
Y D
AcrIF14 I Y K Y S P D H E A Y L F Y C K G G -Q G Q L N K L I A E N G -R F M
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;