3D Structure for MGV-GENOME-0379789_CDS_0158 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.32 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0379789_CDS_0158 1 AcrIE6 0.73 View Alignment MGV-GENOME-0379789_CDS_0158 M Y T I D K E Y L K A L K K R I N G E R E I L I N E S C N N -D N E E T L E K N D A R I V C L E R I A R N V Q N V L --(60)
M D E L K + L + + + + + + L
AcrIE6 M N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
MGV-GENOME-0379789_CDS_0158 --S D M V L L E M A E K V E D N C Q E (80)
+ A+ N
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0379789_CDS_0158 2 AcrIE1 0.64 View Alignment MGV-GENOME-0379789_CDS_0158 M Y --T -I ---D K E -----------Y --------L -K -A -L -K -K ----R I N G E R E I L I N E (60)
M ++ L+N
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A A S I -L -S -L -I -V -F Q A E T L S D Q A N E L A N Y
MGV-GENOME-0379789_CDS_0158 S C N N D N E E T L E K N D A R I V C L E R I A R N V Q N V L -S D -M V L L E M A E -K V -E D N C Q E (113)
+ E +E I V + + + + + + +
AcrIE1 I R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V -Y G -D -A I D -R D V D
MGV-GENOME-0379789_CDS_0158 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0379789_CDS_0158 M Y T I --D K ------E ----------Y L K A L ----K K R I N G E R E I L I N E S C N N -D -N E E T L (60)
M E + K + + N + E +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N -Y S K E L A
MGV-GENOME-0379789_CDS_0158 E K N D A R I V C L E -R I A R N V Q N V L S D M V -L L E M A E K V E D N C --Q E (103)
EK ++ + L+ + L +E +
AcrIIC4 E K ------F N K E -A V N E A V E K L Q K A I D L ------A E K Q G I Q -F
MGV-GENOME-0379789_CDS_0158 4 AcrIC3 0.56 View Alignment MGV-GENOME-0379789_CDS_0158 M Y -T I ---------D ---K E Y L K ---A ----L K K R I N -G E R E --I L I ----N E -S -C N -N (60)
M ++ + + G ++
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R -R -I E -V -
MGV-GENOME-0379789_CDS_0158 -D -N E E T L E K N D A R I V C L E R I A R N V Q N V L S D M V L L E M A E K V E D N C Q E (107)
+ LE A L + + + + +
AcrIC3 A -L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E --R A Q I N K A L E G
MGV-GENOME-0379789_CDS_0158 5 AcrIF23 0.55 View Alignment MGV-GENOME-0379789_CDS_0158 M Y -T -I -------D ----K E --------------Y -L K -----------------A L K -K (60)
M A+
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y -N Y -A A N T R R A S L S P R G I D A R A V -A -
MGV-GENOME-0379789_CDS_0158 -------------------R I N -G -E -R E I L I N E S C N N D -N -E E T L E K N D A R I V C L E -R I (120)
+I +++ +
AcrIF23 K T F G G R A L T G T A R Q K E W A E K I R A -E -K V Q Q M N Q D Q A E --M -A -C D P S G L L T A A K F W I E N -
MGV-GENOME-0379789_CDS_0158 A R -N -V Q ----N -V -L S D --------M V L L ------E M ----A -E -K -V -E D N C ---Q E (179)
+ + +
AcrIF23 R N D -S -A Q E I A -G -F V M -Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A -A -E -Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;