3D Structure for MGV-GENOME-0379463_CDS_0265 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.93 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0379463_CDS_0265 1 AcrVIA2 0.71 View Alignment MGV-GENOME-0379463_CDS_0265 M L G C P F C G H S D -G -----N D D E I I E K E I -N Y M N D -E E -C Q -I D I I K E C D I C G K K Y K V -E K (60)
M C CG E++E + D + C C
AcrVIA2 M W K C K K C G C D R F Y Q D I T G G I S E V L E M D K D G E V L D E I D D -V E -Y G D F S C A K C D N S S S K I Q E
MGV-GENOME-0379463_CDS_0265 --I F T K S -Y E K Y S Y D Y -Y -C Y (81)
+ + Y
AcrVIA2 I A Y W -D E I N -G K N K T Y L S K D K
MGV-GENOME-0379463_CDS_0265 2 AcrIE8 0.52 View Alignment MGV-GENOME-0379463_CDS_0265 M L G C P F C G H S D G N D D -E I I E K -E I N Y -M N ---D -E E C Q -I D I -I K E C D I C G K K ------Y (60)
M + + + G
AcrIE8 M T T I T I N T Y D ---P E A -R --F N ----M -S G E E -A K -E F F -A F V E E Q A K V S G F D V Y Y D S C T
MGV-GENOME-0379463_CDS_0265 K V -E K I -F -T K -S -Y E K -Y S Y D Y Y C Y (86)
+ Y
AcrIE8 Y -V D E -E -S E -R -F V -E K C F Q -N --Y
MGV-GENOME-0379463_CDS_0265 3 AcrIF18 0.51 View Alignment MGV-GENOME-0379463_CDS_0265 M L G -C P -F -C G H S D G N D D E I I E K E I N -Y -M -N -D E E C Q I D I I K E --C D -I C G K K Y K V E K I (60)
M + G V +
AcrIF18 M T T I K A A -Y I S K D Q N -----------W -N -D -G ---T -T T Y W --F D --V -N G E T F G V V H G
MGV-GENOME-0379463_CDS_0265 F T K ---S --------Y -E K Y -----S Y --D -Y Y C Y (95)
+ Y +
AcrIF18 G E S W N A K V V D C D G A P -S D Q Y T V D Q F N I T E -D M I A E
MGV-GENOME-0379463_CDS_0265 4 AcrIC1 0.50 View Alignment MGV-GENOME-0379463_CDS_0265 M L G C P -F -C G -----H --------------------------------------------(60)
M
AcrIC1 M N N L K K T A I T H D G V F A Y K N T E T V I G S V G R N D I V M A I D A T H G E F N D K N F I I Y A D T N G N P I Y
MGV-GENOME-0379463_CDS_0265 -------------------------------------S D --------------------- (120)
AcrIC1 L G Y A Y L D D N N D A H I D L A V G A C N E D D D F D E K E I H E M I A E -Q M E L A K R Y Q E L G D T V H G T T R L
MGV-GENOME-0379463_CDS_0265 -----G ----N D D E -I I E K E I N Y M N -D -E E C -Q I D I I K E C D I C G K K Y K V E K I F T K S Y E K - (180)
G D + + + GK V + +
AcrIC1 A F D D D G Y M T V R L D Q Q A Y P D Y R P E N -D -D -K H I -M W R A L A L T A T G K E L E V F W L V E D Y E D E E
MGV-GENOME-0379463_CDS_0265 Y ------S Y -D Y -Y C Y (196)
D
AcrIC1 V N S W D F D I A D D W R -E L
MGV-GENOME-0379463_CDS_0265 5 AcrIC8 0.50 View Alignment MGV-GENOME-0379463_CDS_0265 M L G -C P F C G ----H -------S --D G ------N D D E I I E K E I -N -Y M N D E E C Q I D I --I K (60)
M G + I +E +
AcrIC8 M Y A I R -K I Q F F Y G P T D K K S Y V G E E A G G R R E L F K T R A E A Q A R I E -D -L -E E --G -V Y Y L A -
MGV-GENOME-0379463_CDS_0265 E -C D I -C G K K Y K V E K I F T K S Y E K Y S Y D Y -Y -C Y (93)
+ YK+ +
AcrIC8 -H N E -S G R P D Y K I V W V -R -G E A -Q F E H A R W M R G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;