3D Structure for MGV-GENOME-0379138_CDS_0062 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.92 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0379138_CDS_0062 1 AcrIC7 0.75 View Alignment MGV-GENOME-0379138_CDS_0062 M K T -V I I E -Y ---A -----T I -------A P D V L I M K I E K A F P G A M A I F K D I D E D Y F E F S -(60)
M T I + ++ + FPGA + ++D
AcrIC7 M A T V T K I T L N G Q N H Y N F G S E C S E A D A E G Y R E W I A Q E L A E N F P G A E I E I N E A D S T -Y S V V V
MGV-GENOME-0379138_CDS_0062 V -W G C N ---D L A M L E D V L A E Y -------------M (95)
+ ++ L D +
AcrIC7 E I D D E S Y Y D E A R G L K D D V N V F C I D A W D R C P W D W V S
MGV-GENOME-0379138_CDS_0062 2 AcrIE8 0.58 View Alignment MGV-GENOME-0379138_CDS_0062 M K T V I I E Y --A ---T -I ---A P D V L I M K I E K A F ---P G A M A I F K -D -I -D --E D Y F E F S V (60)
M T+ I +E + D +
AcrIE8 M T T I T I N T Y D P E A R F N M S G E E A K E F F A F V E E Q A K V S G -F D V Y Y D S C T Y V D E E S E R -----
MGV-GENOME-0379138_CDS_0062 W G C N D L A M L E D V L A E Y M (77)
+E
AcrIE8 -------F V E K C F Q N -Y
MGV-GENOME-0379138_CDS_0062 3 AcrIF15 0.54 View Alignment MGV-GENOME-0379138_CDS_0062 M K T V I I E -Y A T -I -A P D V L I M K I E K A F P G A M A -I F -K D I D E D Y F E F S V W G -------C --(60)
M T+ I ++ + + +E + F
AcrIF15 M T T I T I A Y E V S N -D K V E T I K T M V E -S Q Q I H -N V N -F --N -G E E F T I E R G D F T S I D K D E A E
MGV-GENOME-0379138_CDS_0062 --N D L A M L E D V L A E Y M (76)
L + D++ Y
AcrIF15 H V K L L N K I Q D I I H G Y S
MGV-GENOME-0379138_CDS_0062 4 AcrIIC3 0.53 View Alignment MGV-GENOME-0379138_CDS_0062 M -K T -V I I E -Y --A ----T I ----------------------------------------(60)
M K +I
AcrIIC3 M F K R A I I F T S F N G F E K V S R -T E K R R L A K I I N A R V S I I D E Y L R A K D T N A S L D G Q Y R A F L F N
MGV-GENOME-0379138_CDS_0062 ----A ----P D V L I M K I E K -A F P G A M A I F K D I D E D Y F E -F -S V -W G C N -D -L A -M -L -E - (120)
A L +E G+ + +I+E
AcrIIC3 D E S P A M T E F L A K L K A F A E -S -C T G I S I D A W E I E E S E Y V R -L -P V ----E -R -R D -F -L -A
MGV-GENOME-0379138_CDS_0062 D V --L -A -E -Y M (132)
AcrIIC3 A -A N -G K E I F K I
MGV-GENOME-0379138_CDS_0062 5 AcrIE2 0.51 View Alignment MGV-GENOME-0379138_CDS_0062 M K T V I I E Y --A ------T --I --------A P D V L I -M -K I E K A -F -P G A M A I F K D I -D E D (60)
M T +I+ A ++ + G+
AcrIE2 M N T Y L I D P R K N N D N S G E R F T -V D A V D I T A A A K S A A Q -Q I L G E -E -F E G L V Y R E T G E S N G S
MGV-GENOME-0379138_CDS_0062 -Y F E F S V W G --C -N D L A M L E D V -L A -E -Y -M (91)
N
AcrIE2 G M -F Q A Y H H L H G T N R T E T T V G -Y P F H V M -E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;