3D Structure for MGV-GENOME-0378612_CDS_0135 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0378612_CDS_0135 1 AcrIE1 0.74 View Alignment MGV-GENOME-0378612_CDS_0135 M K I ---E -K -N K L V N ---R --------A -Q -V -L -I Q D I Q L G I I A Y S V A E M A S I I E Q T N A (60)
M + ++ R I I + ++ +
AcrIE1 M E K K L S D A -Q V -A L V A A W R K Y P D L R E S -L -E -E -A -A S I L S L I -V F Q A E T L S D Q A N E L A N
MGV-GENOME-0378612_CDS_0135 K L S S -G E V T E E Q H K A I I D D C T E Y I K S A K E M C N -E S -N M D L E C M Y L V I T -Y -Q -S (114)
+ G E ID + N +
AcrIE1 Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V ---Y G D -A I D -R D V D
MGV-GENOME-0378612_CDS_0135 2 AcrIE6 0.65 View Alignment MGV-GENOME-0378612_CDS_0135 M K I E K N K L V N R A Q V L I Q D I Q L G I I A -Y S V A E M A S I I E Q T N A K L S --S -G E V T E E Q H K A I I (60)
M + ++ I + + + + + +I
AcrIE6 M N -N D T E V L E ---Q Q -------I -K A -F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G
MGV-GENOME-0378612_CDS_0135 D D C T E Y I K S A K E M C N E -S N M D L E C M Y L V I T Y Q -S (94)
+ E + I
AcrIE6 K Q L A S R R A E L I E I L E -E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0378612_CDS_0135 3 AcrIF23 0.54 View Alignment MGV-GENOME-0378612_CDS_0135 M K I E K N K L V N R A Q V -L I Q ------------------------------------------(60)
M + A + + Q
AcrIF23 M T N F Q -T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0378612_CDS_0135 ----------------D I Q --------L G I I -A Y S V A E M A S I I E Q T N A K L S -S G E V T E E Q (120)
I A + + ++ + +
AcrIF23 G G R A L T G T A R Q K E W A E K I -R A E K V Q Q M N Q D -Q A E M A C D P S G L L T A A K F W -I E N R N D S A Q E
MGV-GENOME-0378612_CDS_0135 H K A I I D D C T E Y I K S A K E M C N E ----S N -M -D L E C M Y L V I T Y ---Q -S (167)
+ + + + + +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A -K I A A E Y N A ---L T A R W G F
MGV-GENOME-0378612_CDS_0135 4 AcrIIC4 0.53 View Alignment MGV-GENOME-0378612_CDS_0135 M K I E K --N K L V N ------R A Q V L I Q D I Q L G I I A Y S V A -E M A S I I E Q T N A K L S S G E V T E E Q (60)
MKI + +++VL I + + + + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L -F K S -A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0378612_CDS_0135 H K A I I D -D C T E Y I K S A K E M C N E S N M D L E C M Y L V I T -Y -Q -S (101)
+E + + +E
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D -L ---A E -K -Q ---G -I -Q F
MGV-GENOME-0378612_CDS_0135 5 AcrIC3 0.53 View Alignment MGV-GENOME-0378612_CDS_0135 M K I E K N K L V N ----R ---A Q V L I Q -D I Q L G I I A Y -S V A -E M A S --I -I -E -Q T N A K L S --(60)
M I + + ++ Q+ A S + N ++
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K -T D R G L E S R F L V -P -E A G N R R I -E V
MGV-GENOME-0378612_CDS_0135 --S -G E V T E -E Q H K A I I D D C T E Y I K S A K E M C N E S N M D L E C M Y L V I T Y -Q S (110)
A+ + + EM E + +
AcrIC3 A L -T -G R D L E -A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q ---I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;