3D Structure for MGV-GENOME-0378439_CDS_0259 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 92.40 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0378439_CDS_0259 1 AcrIE1 0.86 View Alignment MGV-GENOME-0378439_CDS_0259 M T K L ------E K D K -----------A -E -K -L -I -D -E -V -I K A I R N Y Q D T N D D W K A Y E R (60)
M K ++ + +D
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S -L -E -E -A -A -S -I -L S L I V F Q A E T L S D Q A N E L A N
MGV-GENOME-0378439_CDS_0259 Y K K E N D L V S A E T Y F R K F Q D G I S Y A E G I Y N A L V T I G F T H P K M K E F -S D M -L (110)
Y + + L AE R + + + G
AcrIE1 Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G D -A I D R D V D
MGV-GENOME-0378439_CDS_0259 2 AcrIE6 0.84 View Alignment MGV-GENOME-0378439_CDS_0259 M T K L E K D K A E K -L -I D -E -V I K A -I R N Y Q -D -T -N D D W K A Y E R Y K K E -N D L V S A E T Y F R K (60)
M E IKA + +
AcrIE6 M -N N ---D T E -V -L E -Q -Q -I K A F E ----L -L -A D E L K D R L P T L E I L S P M Y T A V M V T Y D L
MGV-GENOME-0378439_CDS_0259 F Q D G I S -Y A E G I Y N A L V T I G F -T -H P K M K E F S D M -L (96)
+ + +L
AcrIE6 I G K Q L A S R R A E L I E I L E E Q Y P G -H A A D L -S I K N L C P
MGV-GENOME-0378439_CDS_0259 3 AcrIIA34 0.83 View Alignment MGV-GENOME-0378439_CDS_0259 M T K L ---E K D K A E -------K ----L -I -D -E -V -I -K A -I R N -Y Q D T N D D -W K -A -Y E R (60)
M E + +
AcrIIA34 M K -N I A N E I K T I R Y A F E D G R S T Q K S -I -M -R -K -I -K A -L T D -Q F ----E T M -D D -L I -D
MGV-GENOME-0378439_CDS_0259 -Y -K K E N D L V -S -A E T Y F R K F Q D G I S Y -A E -G I Y N A L V -T I G F ----------T ------ (120)
+ I + +
AcrIIA34 S -L -----N -S -Y -A D T H Y T W A I T Y F Q L -A R I I I S F -Q A S N N T T S E K K I D L Q S G P I E V N G
MGV-GENOME-0378439_CDS_0259 ----------H P -K M ----------K E F S D -M L (153)
K +
AcrIIA34 K L K I R V T V D E F M A D -L A N W E H L E D I K K L A K E L A
MGV-GENOME-0378439_CDS_0259 4 AcrIIA19 0.83 View Alignment MGV-GENOME-0378439_CDS_0259 M T K --L -E -K D K -A E ----K ----L -I -D -E -V ----I K A I R N Y -Q D T N D D W K A Y E -R Y K (60)
M + ++I Y + + R
AcrIIA19 M K L I V E V -E -E T N Y -K N L V N Y T K L -T -N -E -S H N I L V N R L I S E Y I T K P Y E L R L D L S E R -Y
MGV-GENOME-0378439_CDS_0259 K E N -D L V S A E -T Y F R K F Q D G I S Y A E G I Y ---N A L -V -T I -G F -------T ----------(120)
+ + ++ + + A
AcrIIA19 S N R D L -I E F K F M L I E Y C K E A L Q D I K E L A N S D E A -Y -E -T D E -A F E A V F R -Q L F E E V I S N P
MGV-GENOME-0378439_CDS_0259 --H ----P K M K E F S D -M L (138)
F +
AcrIIA19 D T V L K A F H S Y T S F L E E N K
MGV-GENOME-0378439_CDS_0259 5 AcrIIA28 0.82 View Alignment MGV-GENOME-0378439_CDS_0259 M T -K L E K D K A E K L I D E -V I K A -I R N -Y Q D T N D D W K A Y E R Y K K E -N D L -V S A E T Y F R K F Q D (60)
M K E L+ + I + D KE K +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E -L F N S M H D ---F R S Q H A K E A R I -P G W S ----D K Y N K
MGV-GENOME-0378439_CDS_0259 G I -S -Y A -E G I Y N A L V T I G F ---T -H P K M K E F S D ---M -L (100)
+ S
AcrIIA28 L E K -K M -L S D F E E V T G I K Y D T L E -S E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;