3D Structure for MGV-GENOME-0378180_CDS_0017 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 95.67 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0378180_CDS_0017 1 AcrIIA34 0.87 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A ---L N A -D I -R -G M -V Q -A I -K -D F K A -R R -K S A I E A N D -Y E -T A -E Q I W (60)
M + + + + +
AcrIIA34 M K N I A N E I K T I R Y A F E D G -R -S -T Q -K S I -M -R K -I K A L -T -D Q F --E T M -D D -L I -D S L
MGV-GENOME-0378180_CDS_0017 H N E K V M T Q N L A E A N Y Q ----K -I R L -Y Y S K A D A I Y E D K I -I A I C S L P G L I G -M K ----E -(120)
+ + A Q I E + S I
AcrIIA34 N S Y A D T H Y T W A I T Y F Q L A R I -I I S -F -Q A S N N T T S E K -K I D L -Q S G --P I E V -N G K L K I R
MGV-GENOME-0378180_CDS_0017 ---A K L I E C C A N I -----N -G --R K L -Y -A I (151)
AN + +
AcrIIA34 V T V D E F M A D L A N W E H L E D I K K L A K --E -L -A
MGV-GENOME-0378180_CDS_0017 2 AcrIE1 0.84 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A L N A D I R G M V Q -A -I K D F -K -A -R R K S A I E A N D Y E T A E Q I W H N E K V M T Q N L (60)
M KKL +++ + E++E + + ++
AcrIE1 M --E -K K L S D A Q V -------A -L -V A A W -R -K -Y P D L -----R E S L E E A A S I L S L I V F Q A
MGV-GENOME-0378180_CDS_0017 A E A N Y Q K I R L Y Y -S K -A D A I Y E D K I I A I C S L P G L I G ----M K E A K L I E C C A N I N G R K L -Y (120)
++ Q L + + +C + + + + G +
AcrIE1 E T L S D Q A N E L A -N -Y I R -R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R
MGV-GENOME-0378180_CDS_0017 A -I (123)
AcrIE1 D V D
MGV-GENOME-0378180_CDS_0017 3 AcrIE6 0.83 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A L N A D I R G M V Q A I K D F K A R R K S A I E A N D Y E T A E Q I W H N E K V M T Q N L A E A N Y (60)
M ++L I+ ++ + K R + + E + + + +
AcrIE6 M N ---N D T E V L E Q Q I K A F E L L A D E L K D R L P T -L --------E I L S P M Y T A V M V T Y D L I G K
MGV-GENOME-0378180_CDS_0017 Q K I R L Y Y S K A D A I Y E D K I I A I C S L P G L I G --M K E -A K L I E C C A N I N G R K L Y A -I (114)
Q + + I ++ + + +
AcrIE6 Q L A S --------R R A E L I E I L E E Q ---Y P G H --A A D L --------S I K N --L C P
MGV-GENOME-0378180_CDS_0017 4 AcrIF15 0.80 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A L N A D I R G M V Q A I K D F K A R R K S A I E A N D Y E T A E Q I W H N E K V M T Q N L A E -A N (60)
M + ++ +
AcrIF15 M T ---T -I T I A Y E V --------------S ---------------N D K V E T I K T ----M -V
MGV-GENOME-0378180_CDS_0017 -Y -Q K I R L Y Y S K A D A I -Y E D K I I -A I C S L -P G L I G M K E A K L I E C C A N I N -G R K L -Y -A -I (120)
+ + I EA + I +
AcrIF15 E -S ----Q -Q I -H -N V N F N G E E F T I E R G D F T S -I D K D E A E H V K L L N K I -Q D I -I H -G -Y S
MGV-GENOME-0378180_CDS_0017 5 AcrIF3 0.80 View Alignment MGV-GENOME-0378180_CDS_0017 M I -P K Q K K L D A L N A D I -R G M V Q A I K D F K A R R K S A I E A N ----D Y E T A E Q I W H N E K V -M T Q (60)
M D + + I + + + A + + Q
AcrIF3 M S S T I ---S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S S F A A R L H E G L Q A T V L Q
MGV-GENOME-0378180_CDS_0017 N L A E A N Y Q -K I R L Y Y S K A D A I Y E D K I I ---A I C S ---L ----P G L I G -----M -------(120)
L++ + R +A+ +
AcrIF3 R L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G S
MGV-GENOME-0378180_CDS_0017 -K -E -A -K L I E C C A N I -N G R K -L -Y -A -I (149)
+L
AcrIF3 H -V -H -G R L M A I F Q D -R F Q Q -H -Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;