3D Structure for MGV-GENOME-0378180_CDS_0017 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.67 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0378180_CDS_0017 1 AcrIE6 0.72 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A L N A D I R G M V Q A I K D F K A R R K S A I E A N D Y E T A E Q I W H N E K V M T Q N L A E A N Y (60)
M ++L I+ ++ + K R + + E + + + +
AcrIE6 M N ---N D T E V L E Q Q I K A F E L L A D E L K D R L P T -L --------E I L S P M Y T A V M V T Y D L I G K
MGV-GENOME-0378180_CDS_0017 Q K I R L Y Y S K A D A I Y E D K I I A I C S L P G L I G --M K E -A K L I E C C A N I N G R K L Y A -I (114)
Q + + I ++ + + +
AcrIE6 Q L A S --------R R A E L I E I L E E Q ---Y P G H --A A D L --------S I K N --L C P
MGV-GENOME-0378180_CDS_0017 2 AcrIE1 0.66 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A L N A D I R G M V Q -A -I K D F -K -A -R R K S A I E A N D Y E T A E Q I W H N E K V M T Q N L (60)
M KKL +++ + E++E + + ++
AcrIE1 M --E -K K L S D A Q V -------A -L -V A A W -R -K -Y P D L -----R E S L E E A A S I L S L I V F Q A
MGV-GENOME-0378180_CDS_0017 A E A N Y Q K I R L Y Y -S K -A D A I Y E D K I I A I C S L P G L I G ----M K E A K L I E C C A N I N G R K L -Y (120)
++ Q L + + +C + + + + G +
AcrIE1 E T L S D Q A N E L A -N -Y I R -R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R
MGV-GENOME-0378180_CDS_0017 A -I (123)
AcrIE1 D V D
MGV-GENOME-0378180_CDS_0017 3 AcrIF23 0.62 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A ---L N ---A -D I R -----G M V Q A I K D F K -A -R R K S -A I E -A N D Y E T A E Q -(60)
M Q LD RR S D +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W -I D L E T G I A Y D P S Y N Y A A N T R R A S L -S P R G I D A R A V A K T
MGV-GENOME-0378180_CDS_0017 I W ----H N E K V M T Q N L A E A N Y Q K I R L Y Y S K A D A I Y E D K I I A I -C -S L P G L I G ------M K (120)
+ + K+ + D + + I
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L -L -T A A K F W I E N R N D S A Q E
MGV-GENOME-0378180_CDS_0017 E -A K L I E C C A N -------I ------------N ---G R K L Y ---A I (165)
A + + L
AcrIF23 -I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A -L T A R W G F
MGV-GENOME-0378180_CDS_0017 4 AcrIIC4 0.59 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K L D A L N A D I R G M V Q A I K D -F -K A R R K S A I E A N D Y E T A E Q I W H -N -E K -V -M T Q -(60)
M + + +
AcrIIC4 M K I T S S N ---F ----A ---T ----I -A ----T --------------S -E -N -F A -K L S -V
MGV-GENOME-0378180_CDS_0017 N L A E A N Y Q K I R L Y Y -S K A D A I Y E D K I I -A I C S L P ---G L I G ------------M -K -E A -(120)
+ ++ + E + +
AcrIIC4 ----L P K N H R E P I K G -L F K S A V E Q -F S S -A R D F F K N E N Y S K E L A E K F N K E A V N -E -A -V E
MGV-GENOME-0378180_CDS_0017 K L I E C C A N I N G R K L Y A I (137)
+ + + +
AcrIIC4 -K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0378180_CDS_0017 5 AcrIC3 0.57 View Alignment MGV-GENOME-0378180_CDS_0017 M I P K Q K K -L D -A L N A D I R G M V Q A I K D F K A R R K S A I E A N D Y E T A E Q I W H N E K V M T Q -N L --(60)
M + + ++ + K M
AcrIC3 M -S --I Q V -T S T ----N ---G R T V -------N L ---E I E L G S V V A S S G Q V K F M A -D K T D R
MGV-GENOME-0378180_CDS_0017 --A ----E -A --N -Y Q -K I R L Y Y S K A -D A I Y E D K I I A I C S L P G L I G M K E A K L I E C C A N I N (120)
+ + + + + L A+
AcrIC3 G L E S R F L V P -E A -G N R R I E V A L T G R D L -E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q -I
MGV-GENOME-0378180_CDS_0017 G -R K L Y A I (128)
L
AcrIC3 N K A -L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;