3D Structure for MGV-GENOME-0377499_CDS_0258 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.90 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0377499_CDS_0258 1 AcrIIA27 0.73 View Alignment MGV-GENOME-0377499_CDS_0258 M M R L V K V V V E E S E Y -M G -D S R M -I E E F I T V E A D S E S E I I D K V Y R H F D N M S D P C G M M ----(60)
M ++V ES S VEA + E+ K+ S
AcrIIA27 M K T -F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y ---S F S S K W K F N M R
MGV-GENOME-0377499_CDS_0258 --Y N I ----Y -R L ----D V -I --V H I V (87)
R V +
AcrIIA27 D L T A -I D N T -H R -R A W G R R Y -L R V E E A
MGV-GENOME-0377499_CDS_0258 2 AcrIE2 0.65 View Alignment MGV-GENOME-0377499_CDS_0258 M M R L V K V V V E E S E Y -M -G -D S R M I E E F I T V E A D S -E S E -I I D K V Y R H F D N ----M S -D P -(60)
M + R + + + A S + + F+ + +
AcrIE2 M N T Y -L I D -P R K -N N D N -S G E R F T V D A V D I T A A -A K S -A A Q Q I L G E E F E G L V Y R E T G E S N
MGV-GENOME-0377499_CDS_0258 C G M -M Y -N I ---Y R ---L -----D V I V H ---I V (93)
H +
AcrIE2 G S G M -F Q A Y H H L H G T N R -T E T T V G Y P F H V M E -L
MGV-GENOME-0377499_CDS_0258 3 AcrIF19 0.58 View Alignment MGV-GENOME-0377499_CDS_0258 M M R --L V K V -V -------V -E E S E Y M G D S R M I E E F I T V E --A ----------D S E S E I I -(60)
M E + + + E
AcrIF19 M K P L H T M N -Y D N N Q M S L V -Y E S Y D E -Y G F E Y S -V K L K I S V R D Y R G I D V S A F N A -F P E W -E
MGV-GENOME-0377499_CDS_0258 D -K V Y ----------R H F D N -M S D P C G M -M -Y -N I -Y R L D V I V H I V (106)
+ M + +
AcrIF19 -D T L -R M R D R V M S V E E I E N -A M I S R Y K S L -F -I -A P -P D C T Y E F D I
MGV-GENOME-0377499_CDS_0258 4 AcrIC9 0.58 View Alignment MGV-GENOME-0377499_CDS_0258 M M ---R L V -K V V V E E S E Y M G D S R M I E E F I T V E A D S E S E I I D K V Y R H F D N --------M -S (60)
M K + + + ++ ++
AcrIC9 M E T K M T S F Y K -I T A -Y -----N -S -Q A -L Y -F W G T D A D V D R Y -V D W L N R D R E I N V Y A -A E
MGV-GENOME-0377499_CDS_0258 D P -------C G M M Y N I Y R L ------D V I V H -I -V (94)
+ D +
AcrIC9 A I P E A E W A Q Y E G R D D V L S -G E E C G W D D F M S A -E A
MGV-GENOME-0377499_CDS_0258 5 AcrIC8 0.57 View Alignment MGV-GENOME-0377499_CDS_0258 M M R L V K V V V E E S E Y -M G -D --S R -M ---I E E F I T V E A D S E S E I I D K V Y R H F D N ---M -S D (60)
M +++ + G + + E+ ++ +
AcrIC8 M Y -A I R K ---I Q F -F Y G P T D K K S Y V G E E A G G R R E -L F K T R A E A Q A R I E D L E E G V Y Y L A H N
MGV-GENOME-0377499_CDS_0258 P C G M -M Y N I Y R L -D -V I V H I -----V (86)
G Y I + +
AcrIC8 E S G R P D Y K I V W V R G E A Q F E H A R W M R G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;