3D Structure for MGV-GENOME-0377326_CDS_0479 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.07 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0377326_CDS_0479 1 AcrVA5 0.73 View Alignment MGV-GENOME-0377326_CDS_0479 M I Q R Q I W K D E I R I L I T D E Q N H G S V Q I S I P R Y E C N I S G K A D A L I Y A L Y V D T S Y R K Q G V A E Y (60)
M G + SI ++ I + V + ++QG+
AcrVA5 M K -I E -L ---------S -G --G Y I C Y S I -E -------E D E V T I D M V E V T -T -K R Q G I G S Q
MGV-GENOME-0377326_CDS_0479 L L Q L A E Q Q A K L E G I Q V I G L E F D --K -E E S E N F V L K W Y L K N G Y K P F S K -K -S K L L I K E L K D (120)
L+ + A+ IGL S ++ +Y N L +
AcrVA5 L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D -G R L M R -W -S
MGV-GENOME-0377326_CDS_0479 2 AcrIB1 0.71 View Alignment MGV-GENOME-0377326_CDS_0479 M I Q R Q I -W --------------------------------------K ----D E -I R I L I -(60)
M ++++ K ++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
MGV-GENOME-0377326_CDS_0479 T D -E Q N H G S V Q I S I P R Y -----E C -N -I S -------------------G K A D A L I Y A L Y V (120)
++ G +I +S L+ L
AcrIB1 S E D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K
MGV-GENOME-0377326_CDS_0479 D T -S -Y R K Q G V A ----E -Y L L -Q -L A E Q -Q -A K L E G I Q V I G L E F D K E E S E N F V L K W Y L K N (180)
+ L L + I LE E ++ +Y
AcrIB1 N Y S D D I E N L I T G R E L L -T F A -Y -D L F L -K -I K E L I N V K Y I W L E C Q N ---E P K L I S F Y Q N F
MGV-GENOME-0377326_CDS_0479 G Y K P F S K ---K --S K L L I K E L K D (203)
G K K+ I EL
AcrIB1 G F K M L E S L T S E E G L K V M I M E L -K
MGV-GENOME-0377326_CDS_0479 3 AcrIF5 0.43 View Alignment MGV-GENOME-0377326_CDS_0479 M I Q R Q I W K D E I R I L I T D -E Q N H G S V Q I S I P R Y -E C N I S G K A D A L I Y A L Y V D T S Y R K Q G V A (60)
M + +T+ + Y + +
AcrIF5 M S ------R P T V V T V T E T P R ---N ----P G S Y E --V N V E R D G K M V V G R A R -A G ----S D P
MGV-GENOME-0377326_CDS_0479 E Y L L Q L A E Q Q A K L E G I Q V I G L E F D K E E S E N F V L K W Y L -K N G Y K P F S K K -S K L L I K E L K D (119)
++ A Q A G + S N VL L
AcrIF5 G A A A A K A M Q M A M E W G S P N Y V I L G ----S -N K V L A ---F -I --------P -E Q L R V -K -M
MGV-GENOME-0377326_CDS_0479 4 AcrIIC3 0.41 View Alignment MGV-GENOME-0377326_CDS_0479 M I Q R Q I W K D E I R -I L I T D E Q N H G S V Q I S I P -R Y E -C N I S G K A D A L I Y A L -Y V D T S Y R ---(60)
M I T E +S
AcrIIC3 M F -------K R A I I -F T S -----------F N G F E K --V S R T E ---K -R R L A ---K -I I N A
MGV-GENOME-0377326_CDS_0479 K Q G V A E Y L L Q L A E Q Q A K -L E G I Q V I G L E F -D K E E S E N ----F V L K W Y L K N G Y -K P ----F (120)
+ +++ L + +++A L+G + L D + + +
AcrIIC3 R V S I I D E Y L R A K D T N A -S L D G Q Y R A F L F -N D E S P A M T E F L A K L K A F A E S C T G I S I D A W E I
MGV-GENOME-0377326_CDS_0479 --------S -K K S -K L ----L -I K E L -K D (149)
KE+ K
AcrIIC3 E E S E Y V R L -P V E R R D F L A A A -N G K E I F K I
MGV-GENOME-0377326_CDS_0479 5 AcrVIA2_new 0.39 View Alignment MGV-GENOME-0377326_CDS_0479 M -I --Q R Q I W --------K --D -E ------------------------I --R I L I T D ---(60)
M Q+ L+
AcrVIA2_new M K N I H Q K I Q L N K L Q V K T V Q N K -G K D L L I N A P T G S G K T E A S L L A V S D A S K S V S Y L L P T V V S
MGV-GENOME-0377326_CDS_0479 -------------------E ------Q ---N -H G S V Q I S -I P R Y E --C N I S ----G K A D - (120)
+ + + D
AcrVIA2_new T N V M Y L R L K R D Y K L N L S V Q T S T K K E I S N F A -E G V H I K L E C P D F A L I D F I K -T G K K T L G D T
MGV-GENOME-0377326_CDS_0479 A L I Y A L Y V D T S Y -R K Q G V A E Y L L Q L A E Q Q A K L -E G I Q -V I G L E F D -----K ---------(180)
++ E + +++ + + +I +
AcrVIA2_new I I C D E F D H ----Y -----P E M V K S A L M E Y K H T F -S E T Q I I F V S A T L N K E S L M G I D L E E I A
MGV-GENOME-0377326_CDS_0479 ---------E E ----S -E ---N --------------------F -V -L -K W Y L K ------- (240)
+ +
AcrVIA2_new L D T E K N L I K Y K V Y P N -D D F R M D D I I N N G K A Y G K K I G I I F N S I S Q -L -E C F I K P G E D F Y D D
MGV-GENOME-0377326_CDS_0479 ------------------------N --------G Y -K -P F ---------S --K ------- (300)
AcrVIA2_new H F S K F K K G E N D Y I I H S Q V D D Y D K A L A E N A I V N N D -F -S V L I G T D S I S Y S -I D V N F D I L I M
MGV-GENOME-0377326_CDS_0479 --------K --------------------------------------------------- (360)
AcrVIA2_new M A S S E M A T N I Q R L G R C N R L N K H V T D Y N L Y F F G S Y L S D L K A P F I N E N V A F N N L E R I T S S H L
MGV-GENOME-0377326_CDS_0479 ------------------------------------------------------------ (420)
AcrVIA2_new C I S R K N I N E I K K E L P V S E I M E Y I E V K K H V L D E E E S L R P I P F K V R R G I E K E V V K F N A K G L K
MGV-GENOME-0377326_CDS_0479 ------------------------------------------------------------ (480)
AcrVIA2_new Q T K V I K T Y Q T F N M M D L K Y A F C E E Y Y Y D K K N S R A L D V I Q Q F D F E N D W F D R G D F T V K L Y N L K
MGV-GENOME-0377326_CDS_0479 --------------------------------------------------S -K -L L I -K E (540)
+
AcrVIA2_new T E Q Q A L K Q L L L K L E E Y I E P E A P D E T D E D F Y Y R N P D I L L K Y T D Y D K L F I K G W T -Y S I -L S I
MGV-GENOME-0377326_CDS_0479 -L ----K D (548)
AcrVIA2_new D G K T I Y I A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;