3D Structure for MGV-GENOME-0376053_CDS_0036 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.68 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0376053_CDS_0036 1 AcrIB1 0.81 View Alignment MGV-GENOME-0376053_CDS_0036 M E -L V L T K L N ---Q S L E H L R L V G D F E C -----S D E S I E N F L K N D A H N Y D C S G E G N T Y I L I (60)
ME L KL ++ + F + IE FL+ A + S +TY++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
MGV-GENOME-0376053_CDS_0036 D E K D N K I V A Y Y T L K C N G I Q V K D -D -N ---L --------H --------K V L P A L E I A R L G V (120)
DN I+ Y T+ + + + LG
AcrIB1 -S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K
MGV-GENOME-0376053_CDS_0036 D I N Y E --K L G L G S K M L A M A V K V A I H L K E E H V G V K Y I H L F S -V -P D S V D F Y M K K N K A G L K F (180)
+ + L G L A + +++KE + VKYI L P + FY G K
AcrIB1 N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E -L I N V K Y I W L E C Q N E P K L I S F Y Q N F ---G F K M
MGV-GENOME-0376053_CDS_0036 H E Y P K G Y S F L K E E N -S Q E G C K A L Y V T L N E C E D -L Y K K E L S N (221)
+ EG EL
AcrIB1 --L E S -L T ------S -E E G L ----------K -V -M I M E L -K
MGV-GENOME-0376053_CDS_0036 2 AcrVA5 0.56 View Alignment MGV-GENOME-0376053_CDS_0036 M E L V L T K L N Q S L E H L R L V G D F E C S -D E S I E N F L K N D A H N Y D C S G E G N T Y I L I D E K D N K I V (60)
M + L + S
AcrVA5 M K I E L --S G G ------Y I C ---Y S I -----------E -----------------------
MGV-GENOME-0376053_CDS_0036 A Y Y T L K C N G I Q V K D D N L H K V L P A L E I A R L G V D I N Y E K L G L G S K M L A M A V K V A I H L K E E H V (120)
+ I + V + + G+GS + M+ VA
AcrVA5 ------------------E --D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A R E -V ----
MGV-GENOME-0376053_CDS_0036 G V K Y I H L F S --------V P -D S V D F Y M K K N K A G L K F H E Y P K G Y S F L K E E N S Q E G C K A L Y V (180)
I L D ++FY P
AcrVA5 -G L P I G L Y A Y P Q D D S I S Q -E D L I E F Y F S N ---D F E Y --D P -D --D -----V --D ------
MGV-GENOME-0376053_CDS_0036 T L N E C E D L Y K K E L S N (195)
L + +
AcrVA5 -G ----R L M -R -W -S
MGV-GENOME-0376053_CDS_0036 3 AcrVIA1_Lse 0.42 View Alignment MGV-GENOME-0376053_CDS_0036 M E L V L T K L N Q S L E H L R L V G D F E C S D E S I E N F L -K -N D A -H N Y D -C -S -G E G N T Y I L I D E K (60)
M + + ++ + E + + E I
AcrVIA1_Lse M I Y Y I K D ---L K V K G K I F E N -L M N K E ----A -V -E -G L I -T F L K -K -A -E F E --I Y -S R E
MGV-GENOME-0376053_CDS_0036 D -N K I V A Y Y T L K C N G I Q V -K D D N L H K -V -L -P A -L E ---I A R L G V D I N Y E -K L G L G S K M L (120)
+K + ++ + L
AcrVIA1_Lse N Y S K Y N K W F E M W K S P --T S S -L V ---F -W -K N -Y S F R C H L L F V I E K -D -G E C L ---G I P -
MGV-GENOME-0376053_CDS_0036 -A -M -A V K V -A I H L K E -E H V G V K Y I H L F S ----V P -------D S V -----D F Y M K K N K A G (180)
+ + + + +
AcrVIA1_Lse A -S -V -F E S V -L Q I Y L A --D ---P F -A P D T K E L F V E V C N L Y E C L A D V T V V E H F E A E E -S A
MGV-GENOME-0376053_CDS_0036 L K F H E Y --P K -G Y S F L -K E E --------N --S ----Q ---E G -C ---------------K (240)
+ + K
AcrVIA1_Lse W H K L T H N E -T E V S K R V Y -S K D D D E L L K Y I P E -F L D T I A T N K -K -S Q K Y N Q I Q G K I Q E I N K
MGV-GENOME-0376053_CDS_0036 A L Y -------------V -T L N E C E D -------L Y ----K K E L S N (284)
+ ++ K EL N
AcrVIA1_Lse E I -A T L Y E S S E D Y I F T -E Y V S N L Y R E S A K L E Q H S K Q I L K E E L -N
MGV-GENOME-0376053_CDS_0036 4 AcrIC11 0.41 View Alignment MGV-GENOME-0376053_CDS_0036 M E --L --V L T K L N Q S L E H L R L V G D F -E C -S D E S I E N F L K N D A H N Y D C S -G E -G N T Y I L I D (60)
M ++ + +L + E + + E
AcrIC11 M N K E T Q I T A S A V V G E D K R L E F L S K H F G V R F A R R G E A L V F A W L L R L A K V P I E W T R L Q Y Y T L
MGV-GENOME-0376053_CDS_0036 E K D N K I V A Y Y T L K C N G I Q V K D D N L H K V L P A L E I A R L G V D I N Y E K L G L G S K M L A M A V K V A I (120)
Y + L I + ++
AcrIC11 S -N ---S G F Y L A P ---R -----------E -L R I S E C E -L --------S A D A V G I V A T M --
MGV-GENOME-0376053_CDS_0036 H L K E E H V G V K Y I H L F S V P D S -V -D F Y M K K N K A G L K -F H E Y P K G Y S F L -K -E E N S ----Q -(180)
E
AcrIC11 --L T ----------L -R Q L -A -H -E S A A -------C -V E A D -S T Y -P A -A K -L A V T A S -V
MGV-GENOME-0376053_CDS_0036 ---E G -C K A L Y V T L N ---E C E -D -L -Y -K K E L S N (214)
+ L + E + +
AcrIC11 K F A Q -Q Y H H L A A Y S V K H A E S -I -N -I -Y -R A I -D
MGV-GENOME-0376053_CDS_0036 5 AcrVA2 0.40 View Alignment MGV-GENOME-0376053_CDS_0036 M E --L -V L ---T K L ----------N -Q ---S L ---E ------H L R L -------V G D F ---(60)
M + +K+ + + +
AcrVA2 M H H T I A R M N A F N K A F A N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L R G G
MGV-GENOME-0376053_CDS_0036 -------------------------E C S D E S I ----E -N F L -K -N D -A H N -Y D C -S ---- (120)
DE I D +
AcrVA2 K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C -K E L -P -D -D T -P T S I F -L -N L P D
MGV-GENOME-0376053_CDS_0036 -----G -E -G N T Y I L I D E -K D -N K I V A Y Y T ---L K C N G -I Q V K -D -D N -L H ----K -V -- (180)
+ + D+ +I + I L
AcrVA2 W C V Y V -D I S S A Q I A T F D D G V -A K H I K G F W A I Y D I V E M N G I ---N -H -D V L -D F V V -D -T D
MGV-GENOME-0376053_CDS_0036 L --P A L E -I A -R L G V D I N Y E K L G L G S K M L A M A V K V A I H L K E E ---H ----V -G -V K Y I H L (240)
+ + + + +A ++ + L ++ + Y+
AcrVA2 -T D D N V Y V P -Q P F I L S -S ---G ---Q S -V A E V L D Y G A S L F D D D T S N T L I K -G -L L P Y L L W
MGV-GENOME-0376053_CDS_0036 -F S -V P -D S V D F Y M K K N K -A G L K F H -E Y P K G Y S -F -L -K -E E N S --------Q --E G -C K (300)
D + Y G
AcrVA2 L C V A E -P D -I T -Y -----K -G --L P V -S R E ---E -L -T -R -P K H S I N K K T G A -F V T -P S E
MGV-GENOME-0376053_CDS_0036 A L -Y V T L -------N -E C -E -D -------------------------------------L (360)
Y +
AcrVA2 P F I Y Q I G E R L G S E V -R R -Y -Q S I I D G E Q K R N R P H T K R P H I R R G H W H G Y W Q G T G Q A K E F R V
MGV-GENOME-0376053_CDS_0036 -----Y ----K K E -L S N (377)
+
AcrVA2 R W Q P A -V F V N S G R V S -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;