3D Structure for MGV-GENOME-0375281_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.03 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0375281_CDS_0008 1 AcrIE1 0.73 View Alignment MGV-GENOME-0375281_CDS_0008 M D ---R K V F E A L S S ---A N K L I N H Q L D C Q K A A I P D I K K A I E E T A K A F N I T Y K Q G R S E G F E (60)
M+ + AL + +L+ ++ I +E N R
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q ---
MGV-GENOME-0375281_CDS_0008 S E T I D D I -A -E -I -Y -G -Y L -I -G A K G -A I -E A G -I S K L E E A K N M M P N F -D ---K -G M N T (120)
+ + E+ +
AcrIE1 -----G -L -E -E -A -E -G -A C -R -N I D I -M R A K -W V E V C G E V N Q H G I R V Y G D A I -D R D V D
MGV-GENOME-0375281_CDS_0008 2 AcrIE6 0.66 View Alignment MGV-GENOME-0375281_CDS_0008 M D R K V F E A L S S A N K L I N -H Q L D C Q K A A I P D I K K A I E E T A K A F N I T Y K Q G R -S -E G F E S E T (60)
M + Q I +++E
AcrIE6 M N -N D ---T E V L E ----Q -Q -------I K A F E L L A D E L K D R L P T L ----E I -L ---S P -M
MGV-GENOME-0375281_CDS_0008 I D -D I A E I Y G Y L -I G A K -G A I E A -G I S K L E E A K N M M P -N --F -D -K G M N T (110)
+ Y + A I LEE
AcrIE6 Y T A -V M V T Y D L I G -K Q L A -S R R A E L I E I L E E Q Y P G H A A -D L S I -K -N L C P
MGV-GENOME-0375281_CDS_0008 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0375281_CDS_0008 M D R K ---V F E A L -S S -A -N K L I N H Q L D C Q K A A I P -D I -K K A I E E T A K A F -N I T Y K Q G R S E (60)
M F + + ++ + I + K A+E K +E
AcrIIC4 M K -I T S S N F A T I A T -S E N F A K L S V L P K N H R E P I K G -L F K S A V E Q F S S -A R D -F F K ---N E
MGV-GENOME-0375281_CDS_0008 G F E S E T I -D D I -A E I Y G Y L I G A K G A I E A G I S K L E E A K N M M P N F D -K -G -M -N -T (114)
E + K A+ + KL A
AcrIIC4 N Y S K E L A E ---K -----F ---N K E A V N E A V E K L Q K A I D L A E ---K -Q -G -I -Q F
MGV-GENOME-0375281_CDS_0008 4 AcrIC3 0.55 View Alignment MGV-GENOME-0375281_CDS_0008 M D R K V F E A L S S -------A N -K L I -N H Q L D C Q K A A I -P -D I K K A I E E T A K -A F N I T Y K Q G (60)
M V + + + K + + G
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S V -V A -S S G Q V K F M A D -K ----T D R G L -E S -R F L V P E A G
MGV-GENOME-0375281_CDS_0008 R S E G -F E S -E T I D D I A E I Y G Y L I G A K G A I E A G I S K L E E A K N M M P N F D K G M N T (112)
T D+ + + +EA E+ + K
AcrIC3 N R -R I E V -A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0375281_CDS_0008 5 AcrIB2 0.54 View Alignment MGV-GENOME-0375281_CDS_0008 N /A (3)
N/A
AcrIB2 N /A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;