3D Structure for MGV-GENOME-0375229_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.49 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0375229_CDS_0006 1 AcrIE6 0.72 View Alignment MGV-GENOME-0375229_CDS_0006 M V S E D K L K H Y S I N F L K S E I D K I H E A L E V I Q N D E ----E R D G E R R L L T E L V R D Y K R D L L -E (60)
M ++ + +I +D +++ L + L+ + + +L+
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
MGV-GENOME-0375229_CDS_0006 I E -------N S L --E --E C (79)
+E L
AcrIE6 L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0375229_CDS_0006 2 AcrIIC4 0.59 View Alignment MGV-GENOME-0375229_CDS_0006 M -V S E D K L K --H -------------Y ----S -I N F L K S E I D K I H -E A L E V I Q N D E E ----(60)
M ++ KS ++ A + N+
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K -N H R E P I K G L F K S A V E Q -F S S A R D F F K N E N Y S K E L
MGV-GENOME-0375229_CDS_0006 R D G E R R -L L -T -E -L V -R D Y K -R D L L -E I E -N S -L -E E C (99)
+ + + + + ++
AcrIIC4 A E K F N K E -A V -N -E -A V E -K L Q K -A I D L -A E K -Q -G I Q F
MGV-GENOME-0375229_CDS_0006 3 AcrIE1 0.56 View Alignment MGV-GENOME-0375229_CDS_0006 M -V ---S -E D K L K H ----------Y -----------S -I N -F L K -S -E I D K I H -E A L E V I (60)
M + + + D + E++ I
AcrIE1 M E K K L S D A Q -V A L V A A W R K Y P D L R E S L E E A A S I L S L -I V -F Q A -E -T L S D Q A -N E L A N Y I
MGV-GENOME-0375229_CDS_0006 Q N D E --E ----R D G E R R L L T E L V R ----D -Y -K -R -D L L E I E -N S L -E -E -C (112)
E + + + + + +
AcrIE1 R R -Q G L E E A E G A C R N I D I M R A K W V E V C G -E -V -N -Q H G I R V Y G D -A I D R D V D
MGV-GENOME-0375229_CDS_0006 4 AcrIF23 0.56 View Alignment MGV-GENOME-0375229_CDS_0006 M -V ---------------------------------------------------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0375229_CDS_0006 ------------------------S E D K L K H Y S I N F L K S E I D K I H E A L E V I Q N D E ----E (120)
+ + ++ +E +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q -D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
MGV-GENOME-0375229_CDS_0006 R D G E R R L L T E --------L V R D Y K R D -L L -E -I E N S L -E E --C (163)
++L D + N L
AcrIF23 F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I -A A -E -Y N A L T A R W G F
MGV-GENOME-0375229_CDS_0006 5 AcrIF3 0.52 View Alignment MGV-GENOME-0375229_CDS_0006 M V --S E D K L K H -----------------------Y -------S I N F L K S E -I D K I H E A L E (60)
M D++ + L+ + L
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S S F A A R L H E G L Q A T V L Q R L V
MGV-GENOME-0375229_CDS_0006 V I Q N D E ---------------E R D ---------G E R R L L T ----E ---------L V R -D Y (120)
+N + + G +
AcrIF3 D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G -S H V
MGV-GENOME-0375229_CDS_0006 K R D L L E I -E N S ---L -E -E --C (142)
+ L I + C
AcrIF3 H G R L M A I F Q D R F Q Q H Y -E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;