3D Structure for MGV-GENOME-0375229_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.70 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0375229_CDS_0004 1 AcrIE1 0.74 View Alignment MGV-GENOME-0375229_CDS_0004 M I R P S I N N I I N -S D P F E L L D W A K E N F S Y E V P S G I N S V -S D M G R V G T L L G T L T N E Y S Y L V S (60)
M ++ L+ + + ++L + L
AcrIE1 M -E K K L S ----D -A Q V A L V A A W R K -Y P D ----L ---R E -S L E E A A S I L S L I V F Q A E T L S D
MGV-GENOME-0375229_CDS_0004 L T T E L A L H S K M A K L N V P A K P K N A D D M P Y Y I E K K E E A E I M E Q R K K V V E C F A N M L K -Q Q -Y N (120)
+ELA + + E + M
AcrIE1 Q A N E L A N Y I R R ---Q G ---L ---------------E E ----A E G A C R N I D I M R -A -K W -V
MGV-GENOME-0375229_CDS_0004 A V S R M L T -V Y S Q T Q E E -L K -M T D Y K K (146)
V ++ + +
AcrIE1 E V C G E V N Q H G I R V Y G D A I D R -D -V -D
MGV-GENOME-0375229_CDS_0004 2 AcrIE6 0.64 View Alignment MGV-GENOME-0375229_CDS_0004 M I R P S I N N I I N S D P -F E L L D W A K -E N F S Y E V P S G I N S V S D M G R V G T L L G T L T N E Y S Y L V S (60)
M + + +
AcrIE6 M -N N D ----T E V L -E --------Q ------------Q -------------I K A F E L L A D E
MGV-GENOME-0375229_CDS_0004 L T T E L A L H S -K -M A K L N V P A K --P K N A D D M P Y Y I E K K E E A E -I M E Q R K K V V E C F A N M L K Q (120)
L L + L +
AcrIE6 L K D R ----L P -T ---L -----E I --L -------------S P M -Y T A V M V T Y D L I G K Q L A S
MGV-GENOME-0375229_CDS_0004 Q Y N A V S R M L T -V -Y S -Q -T Q E E L K --M T D -Y K K (153)
+ L +L
AcrIE6 R R A E L I E I L E E -Q -Y P -G H A A D L S I K N --L -C P
MGV-GENOME-0375229_CDS_0004 3 AcrIC3 0.56 View Alignment MGV-GENOME-0375229_CDS_0004 M I R P S I N N I I N S D P F E L L D W A K E N F S Y E V P S G I N S V S -D -M G R V G T L L G T L T N -E -Y S Y L (60)
M ++++ + + + +
AcrIC3 M S -I Q V T S T N G ----R T V ------N L E -I --------E -L -------G S V V A -S -S -G Q V
MGV-GENOME-0375229_CDS_0004 V S L T T E L A L H S K M A K -L N V P A K P K N A D D M P Y Y I E K K -E E A E I M E Q R K K V V E C F A N M L K -Q (120)
E E + A +
AcrIC3 K F M A D K T D R G -L E S -R F L -V P -E A G N ---R R I -E V A L -T G R D L E A A N A L F S E L A A S V -E -
MGV-GENOME-0375229_CDS_0004 -Q -Y N A V S R M -L T -V -Y S Q -T Q E E L K M T D Y K K (152)
N R +
AcrIC3 A -T -N E M Y R E L D -A -E R A -Q I N K A -L ---E -G
MGV-GENOME-0375229_CDS_0004 4 AcrIIC4 0.56 View Alignment MGV-GENOME-0375229_CDS_0004 M I R P S I N N I I N S D -P F E L L D W A K E N F S Y E V P S G I N S -V S D M G R V G T L L G T L T N E Y S Y L V S (60)
M + +N A L N +
AcrIIC4 M K I -T S S N -----F -A ---T I A -------T ------S -E N ---F A K L S V L P K N H R E P I K G
MGV-GENOME-0375229_CDS_0004 L T T E L A L H S K -M A K -L N V P A K P K N A D D M P Y Y I E K K E E -A E I M E Q R K K V V E C F A N M L K Q Q -(120)
L ++ A+ N E
AcrIIC4 L F K S A V E Q F S S -A R D F F K -----N E N Y ----S K E L A E K ------------F N K E ----A V
MGV-GENOME-0375229_CDS_0004 Y N -A -V S -R -M -L T V Y S Q T Q E E L K M T D Y K K (150)
N + E
AcrIIC4 -N E -A -V E -K -L -Q K A I D L A E K Q G I --Q -F
MGV-GENOME-0375229_CDS_0004 5 AcrVA1 0.54 View Alignment MGV-GENOME-0375229_CDS_0004 M I ----------R P S I N ---N I I N -S -D -P F -E L ---L -D -W -A K E N F S ------Y ---E (60)
M + ++ L +
AcrVA1 M Y E A K E R Y A K K K M Q E N T K I D T L T -D -E -Q H -D A L A Q L -C -A -F R H K F -H S N K D S L F L S E S
MGV-GENOME-0375229_CDS_0004 V P S G -I N S V S D M G R V G T L L G T L T N E Y S Y -L V S -L T T E L A -L H S K -M A K ----L N -V P A K P (120)
+ SG S L + + +
AcrVA1 A F S G E -F S F E ---M Q S D E N S K L R E V G L P T -I E W S F Y D N S H I P D D S F R -E W F N F A N Y S E L S
MGV-GENOME-0375229_CDS_0004 K N A -D D -M P Y Y I E K K E E A E I M E Q R K -K -V V E C F A N M L K Q Q Y N A V S R M L T V Y S Q T Q E E L K -(180)
++ + + ++ E E + + + + L
AcrVA1 E T I Q E Q G L E L D L ---D D D E T Y E L V Y D -E L Y T E A M G E Y E E L N Q D I E K Y L R R I D E E H G T Q Y C
MGV-GENOME-0375229_CDS_0004 M T D ---Y K K (189)
T +
AcrVA1 P T G F A R L -R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;