3D Structure for MGV-GENOME-0374567_CDS_0138 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.99 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0374567_CDS_0138 1 AcrIE6 0.76 View Alignment MGV-GENOME-0374567_CDS_0138 M R E I ----I -R -E -Y I D E L G S K I K R C E T K I V N T K -D V G Y E A R M M A R ----L D -A -L -T -E (60)
M I + ++ + M+
AcrIE6 M N -N D T E V -L -E -Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G -K -Q -L -A -
MGV-GENOME-0374567_CDS_0138 -V -R N D L L E R L D E I D G ----I -N H -K -R I S K (91)
R +L+E L+E + +
AcrIE6 S -R R A E L I E I L E E Q Y P G H A A D L S -I -K N L C P
MGV-GENOME-0374567_CDS_0138 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0374567_CDS_0138 M R E --I -I R -E ---------------Y ----I D E L G S K I K -R C E -T K I V N T K -D V G Y -E A (60)
M+ I L + + K +
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y -S K E
MGV-GENOME-0374567_CDS_0138 R M -M A R L -D -A L -T E V R N D L -L E R L -D E I D G I N H K R I -S K (100)
A +E+ + D + +
AcrIIC4 L -A E K F N K -E A -V N E A V E K -L Q K -A I D -L A E K Q G -I -Q -F
MGV-GENOME-0374567_CDS_0138 3 AcrIE1 0.61 View Alignment MGV-GENOME-0374567_CDS_0138 M R ---E I I R ----E -------Y ----I ----D --------E -L -G S -K I K ----R C E T K I (60)
M + + + + I
AcrIE1 M E K K L S D A Q V A L V -A A W R K Y P D L R E S L E E A A -S I L S L I V F -Q -A -E T -L S D Q A N E L A N Y I
MGV-GENOME-0374567_CDS_0138 V N T K D V G Y E A R M ---M A -R -L D A L T E V R N -D L L -E -R -L -D E I D G I N -H -K -R I S K (116)
+ + EV ++ + G
AcrIE1 R R Q -G L E E A E G A C R N I D I -M R A K W V E V C -G E V -N -Q -H -G I R V Y G D A I -D -R -D V D
MGV-GENOME-0374567_CDS_0138 4 AcrIC3 0.55 View Alignment MGV-GENOME-0374567_CDS_0138 M R -E -I I R -E ---------Y ----I -D -------E L G S K I K -R C E -----------T -K I (60)
M + K +I
AcrIC3 M S I -Q V -T S T N G R T V N L E I E L G S V -V -A S S G Q V K F M A D K T D R G L -E S R F L V P E A G N -R R I
MGV-GENOME-0374567_CDS_0138 V -N -T -K ---D V -G -Y -E -A -R -M -M -A -R L -D A L T E V R N D L L E R L D E I D G I N H K R I S K (119)
D+ L A E+ N+ LD K +
AcrIC3 -E -V -A L T G R D L E -A -A -N -A -L -F -S -E -L A -A S V E A T N E M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0374567_CDS_0138 5 AcrIB2 0.54 View Alignment MGV-GENOME-0374567_CDS_0138 N /A (3)
N/A
AcrIB2 N /A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;