3D Structure for MGV-GENOME-0373787_CDS_0072 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.44 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0373787_CDS_0072 1 AcrIE6 0.71 View Alignment MGV-GENOME-0373787_CDS_0072 M N L Y N E M N -N -L F E R K Q A P I K N K I K A M E N V L G -Y S I S D E L R K C L D K E I F K L K T K L D I S Q E (60)
MN + E + L I + + L
AcrIE6 M N N --D T -E -V -L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A
MGV-GENOME-0373787_CDS_0072 M Q I D V L -N K I L E Y E N ----K --N S (84)
I++L K
AcrIE6 E L I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0373787_CDS_0072 2 AcrIE1 0.61 View Alignment MGV-GENOME-0373787_CDS_0072 M -N ---L -Y -N -E -M -N -N ---L -------F E ----R ----K -Q -A -P -I -K -N K I K A M E (60)
M +
AcrIE1 M E K K L S D A -Q -V -A -L -V A A W R K Y P D L R E S L -E E A A S I L S L -I -V -F -Q -A -E T L S D Q A -
MGV-GENOME-0373787_CDS_0072 N -V L G Y S I S D E L R K C L D -K E I -F -K L K -T K -L -D I S -Q E -M Q I -D V L -N K -I L E Y E -N --(120)
N + I + + +V + +
AcrIE1 N E L -A N Y I R R -Q G L E E A E G -A C -R N I -D I -M -R A -K W -V E V C -G E V -N Q -H G I R V Y G D A I
MGV-GENOME-0373787_CDS_0072 -K --N S (126)
AcrIE1 D -R D V D
MGV-GENOME-0373787_CDS_0072 3 AcrIF23 0.60 View Alignment MGV-GENOME-0373787_CDS_0072 M N L Y N E ----M N -N ------------L ----F E ---------------------------(60)
M+ +
AcrIF23 M T N F Q T W L D S A -D -I P V Q Q N G Q W I D L E T G I A Y -D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
MGV-GENOME-0373787_CDS_0072 --R ---------K Q -A ----P I K -N K -I K A M E N V L G --Y -S I S D E L R K C L D K E I F K L K T K (120)
I+ + M + L +
AcrIF23 T F G G R A L T G T A R Q -K -E W A E K I R A -E K V Q Q M N Q D Q A E M -A ----C D P S G L L T A A K F W I E N
MGV-GENOME-0373787_CDS_0072 L D I S -------Q -E -M -Q -I D V L -------------------N -K -I -L E Y E N -K -N -S (179)
S +L
AcrIF23 R N D S A Q E I A G F -V -M -Q -Q K A L L A Q H R S A K A A G Q A D K V A K I A -A -E -Y N A L T -A -R W G F
MGV-GENOME-0373787_CDS_0072 4 AcrIIC4 0.59 View Alignment MGV-GENOME-0373787_CDS_0072 M N -L Y N E ---M N N ----------L ----F E R K Q A -P -I -K -N K I -K A M E N V L G Y S I S -D -(60)
M + + + ++ +
AcrIIC4 M K I T S S N F A T I A -T S E N F A K L S V -L P K N H R E P I K G -L -F -K S -A V E Q F S S A R D F F K N E -N
MGV-GENOME-0373787_CDS_0072 E L R K -C L -D K E I F K -L K -T K L D I S Q -E -M Q I -D V L N K I L E Y E -N ---K -N S (111)
K +K + L+K+++
AcrIIC4 -Y S K E L -A E K ----F -N K E ----A V N -E -A V E -K L Q K A I D L A E K Q G I -Q -F
MGV-GENOME-0373787_CDS_0072 5 AcrIC3 0.57 View Alignment MGV-GENOME-0373787_CDS_0072 M -N L Y -N E M N N ----------L F E ----------R K Q A -P I -K -N K ---I -K -A M E N V L G (60)
M + + K+ ++ A +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V -A S S G Q V K F M A D K T D R G -L -E S R F L V -P -E A G N R R I E
MGV-GENOME-0373787_CDS_0072 Y S I S D E L R K C L D K E I F K L K T K L D I S Q E M Q I D V L N K I L E Y E N K -N S (105)
++ + L +++++EM ++ +
AcrIC3 V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;