3D Structure for MGV-GENOME-0372872_CDS_0108 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.62 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0372872_CDS_0108 1 AcrIE6 0.71 View Alignment MGV-GENOME-0372872_CDS_0108 M E K L T E N E K Y H A L L C V K Y V R H E L S I K S L K L E I E Y -E S H T H Y D A E L E Q S I G Q T D E S I T F --(60)
M + + EL + L + + + ++
AcrIE6 M N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L ----E -I L S P M Y T A V M V T Y D L I G K Q L A S R R
MGV-GENOME-0372872_CDS_0108 --Y D A L I ----N K -L E -N ----L --L (86)
++
AcrIE6 A E L I E I L E E Q Y P G H -A A D L S I K N L C P
MGV-GENOME-0372872_CDS_0108 2 AcrIE1 0.65 View Alignment MGV-GENOME-0372872_CDS_0108 M E K L -------T E -N --------E -----------K Y H A L L C V K -Y V R H -E L S I K S L K L E (60)
MEK ++ +
AcrIE1 M E K K L S D A Q V A L -V -A A W R K Y P D -L R E S L E E A A S I L S L I V F Q -A E T -L S D -Q A N E L A N Y -
MGV-GENOME-0372872_CDS_0108 -I -E Y E S H T H Y D A E L E Q S I G Q T D E S I T F -Y D ---A L I N K L -E ----N -L --L (112)
+ + +I ++
AcrIE1 I -R -R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G D A I D R -D V D
MGV-GENOME-0372872_CDS_0108 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0372872_CDS_0108 M E K L ---T E N ------E -----------K Y -H -A L L -C V K -Y V R -H E L S I -K S -L K L E I E (60)
M + +
AcrIIC4 M K I T S S N F A -T I A T S E -N F A K L S V L P K N H R E -P I -K G L -F K S -A V E -Q F S S -A R D F F K --
MGV-GENOME-0372872_CDS_0108 Y E S H -T -H Y D A E L E Q S I G -Q T D E S I T F Y D A L I N K L E ---N -L L (103)
+E E + +I +E
AcrIIC4 ---N E -N Y S K E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G -I Q F
MGV-GENOME-0372872_CDS_0108 4 AcrIF23 0.56 View Alignment MGV-GENOME-0372872_CDS_0108 M E K --L -T E N --E -------------K ---------------------------------(60)
M ++
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0372872_CDS_0108 ----------------------Y H -A L L C V K --Y V R -H E L S I K S L K L E -I -E Y E S ---H - (120)
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q -Q -M N Q D -Q A E --M A C D P S G L -L T A A -K F --W I E N -R
MGV-GENOME-0372872_CDS_0108 T ----H ----Y D A E L E -Q S I -G -Q -T -----D ----E S I T F Y D A L I N K L E N L --L (175)
+ + A N L
AcrIF23 -N D S A Q E I A G F V M Q Q -K A L -L -A -Q -H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0372872_CDS_0108 5 AcrIIA28 0.54 View Alignment MGV-GENOME-0372872_CDS_0108 M E -K L --------T E N -E -K Y H A L L C V K Y V R H -E L S I -K S L K L E I E Y E S H T H ----Y D A E (60)
M + H +K + +
AcrIIA28 M K T I F T K K Q T E E L L N -D -I S I E K Q K E L F N S M H D -F R S Q -H A K E A -R I P G W S D K Y N K L E K K
MGV-GENOME-0372872_CDS_0108 L E Q S I G Q T -D E S I T F Y D --A L I N K L E -N L ---L (93)
+ + ++ L
AcrIIA28 M L S D F E E V T G I K Y D T L E S E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;