3D Structure for MGV-GENOME-0372872_CDS_0102 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.06 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0372872_CDS_0102 1 AcrIIA27 0.76 View Alignment MGV-GENOME-0372872_CDS_0102 M F K D Y S F Y V K C -N --------D N P L M L I K V V A D N Y D E A I E F A K S S Y S A N C --S -----I Y (60)
M + V + KV A N EA A+ YS + +
AcrIIA27 M K -T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T
MGV-GENOME-0372872_CDS_0102 A D -D -R Y -----N -D -W H I T P K Y C -Y H D (88)
A +
AcrIIA27 A I D -N -T H R R A W -G -R R Y L R V ---E -E A
MGV-GENOME-0372872_CDS_0102 2 AcrIE2 0.71 View Alignment MGV-GENOME-0372872_CDS_0102 M F K D Y S F Y V K -C -N -----D N --P L M L I K -V -V -A D -N Y D E A I E F A K S S Y S -A N --C S I Y (60)
M Y N + + A A +
AcrIE2 M -N T Y L -I D P R -K N N D N S G E -R F ----T -V -D -A V -D I T A A A K S A A Q Q I L G E E F E G L V Y R
MGV-GENOME-0372872_CDS_0102 A D D -R -----Y -------N D W --H ---I -T P K Y C Y H D (97)
P
AcrIE2 E T G E S N G S G M F Q A Y H H L H G T N R T E T T V -G Y P F H V M E L
MGV-GENOME-0372872_CDS_0102 3 AcrIC9 0.61 View Alignment MGV-GENOME-0372872_CDS_0102 M F ---K D Y S F Y V K C N D N P L M L I K V V A D N Y D E A I E F A K S S Y S A -N C S I --Y A D D R ---Y --(60)
M + + D ++++ + + + Y
AcrIC9 M E T K M T S F Y K I T A -Y N S Q A L Y F W G T D A D V D R Y V D W L N R D R E I N V Y A A E A I P E A E W A Q Y E G
MGV-GENOME-0372872_CDS_0102 -N D W H I ----T P K Y C --Y H D (80)
D
AcrIC9 R D D V L S G E E C G W D D F M S A E A
MGV-GENOME-0372872_CDS_0102 4 AcrIE8 0.58 View Alignment MGV-GENOME-0372872_CDS_0102 M F K D Y S F Y V K C N D N P L M L I K V V A D N Y D E A I E F A K S S ----Y -S A N --C -S -I Y A D D R Y -N (60)
M + P + E F+ + Y+ D
AcrIE8 M -T T I T I N -T -Y -D P E A R F N M S G E E A K E F F A F V E E Q A K V S -G F D V Y Y D S -C T Y V -D E E S E
MGV-GENOME-0372872_CDS_0102 D W H I T P K Y C Y H D (72)
+
AcrIE8 -R F V E K C -F Q N Y
MGV-GENOME-0372872_CDS_0102 5 AcrIF9 0.57 View Alignment MGV-GENOME-0372872_CDS_0102 M F K D Y S F Y V K C N -D N P L M L I K V V A D N Y D E A I E F A K S S Y ---S A N C S I Y A D D R Y N D W H ---(60)
M Y N + + A + A A I W
AcrIF9 M K A A Y I I K E V Q N I N S E R E G T Q I E A T S L S Q A K R I A S K E Q C F H G T V M R I E --T V N G L W L A Y K
MGV-GENOME-0372872_CDS_0102 I T P K Y C Y H -D (70)
K
AcrIF9 E D G K R W V D C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;