3D Structure for MGV-GENOME-0372658_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.50 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0372658_CDS_0005 1 AcrIE1 0.73 View Alignment MGV-GENOME-0372658_CDS_0005 M -K -H ---F D I F Y G ---M ----D N -E D -F Q N -L Q A I T E L M Y T A K T L Y R N I S E L H S Q I C R S (60)
M K + +++++ + +A TL +++EL + I R+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R -E S -L E E -A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q
MGV-GENOME-0372658_CDS_0005 Q D R T I S E ---L S L D A A L A F N K L Y D A L Q A E Q K T I L N G I E I D M -P E -T T (107)
+ + + + ++ + +
AcrIE1 G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I ---D -R D V D
MGV-GENOME-0372658_CDS_0005 2 AcrIE6 0.69 View Alignment MGV-GENOME-0372658_CDS_0005 M K H F D I F Y G M D N E D F Q N L Q A -I T E L M Y T A K T L Y R N I S E L H S Q I C R -S --Q D R T I S E L S L D (60)
M Q L + + ++ +
AcrIE6 M -N -N D T E V ----L E ---Q -Q ----I K A F E L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D L
MGV-GENOME-0372658_CDS_0005 A A L A F N K L Y D A L Q A E Q K T I L N G I E -I D M -P E T -T (94)
+ L G
AcrIE6 I G K Q L A S R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0372658_CDS_0005 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0372658_CDS_0005 M K -H F D I ---F -Y G -----M -D N -E D -F Q N L Q A I T E L M Y T A K T L Y R N I S E L H S Q I C R S Q D (60)
MK + I L +A ++ + +
AcrIIC4 M K I T S S N F A T -I A T S E N F A K L S -V L -P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N ----
MGV-GENOME-0372658_CDS_0005 R T I S E L S -L D A A L A F N K L Y D A L Q A E Q K T I L N G I E -I D M -P E T T (103)
EL A N + + LQ + +E
AcrIIC4 Y -S K E L A E K F N K E A V N E A V E K L Q K A I D -L ---A E K -Q -G I Q -F
MGV-GENOME-0372658_CDS_0005 4 AcrIC3 0.57 View Alignment MGV-GENOME-0372658_CDS_0005 M K H F -D I F Y G -M D N E D ---F Q N L -Q -A -I T E L M Y T A K T L Y R N I S E L H S Q I C R -S -----Q (60)
M G N ++ + A R + + +
AcrIC3 M S I Q V T S T N G R T V N L -E I E L G S V V -A -S S G Q V K F M A D K T D R G L E S -R F L V P -E -A G N R R I
MGV-GENOME-0372658_CDS_0005 D R -T I S E L S L D A A L -A F N K L Y D A L Q A ---E Q K T I L N -G -I E I D M P -E T T (109)
+ A +F+ L + A + +
AcrIC3 E V A L T G R D L E A A N -A L F S E L A A S V E A T N E M Y R E L D -A -E R A Q I N K A L E G
MGV-GENOME-0372658_CDS_0005 5 AcrVA1 0.55 View Alignment MGV-GENOME-0372658_CDS_0005 M K ------------H F D I F Y G M D N E D ---F Q N L Q A I -T E L --------M -Y -------T -(60)
M E +L A
AcrVA1 M Y E A K E R Y A K K K M Q E N T K I D T L T D E Q H D A L A Q L C A F R H K -F H S N K D S L -F -L S E S A F S G E
MGV-GENOME-0372658_CDS_0005 --A ---K T L Y R N I S E -L H -S Q I C ---R -----------------S --------------- (120)
+ + +I
AcrVA1 F S F E M Q S D E N S K L R -E V G L P T I E W S F -Y D N S H I P D D S F R E W F N F -A N Y S E L S E T I Q E Q G L
MGV-GENOME-0372658_CDS_0005 ---------Q D R T I -S E L S L D A A L A F N K L Y D A L Q A E Q K T I L N -G I -E I D -M --P -E T T (178)
+ + EL +A L + + I
AcrVA1 E L D L D D D E T Y E -L V Y D E L Y T E A M G E Y E E L N Q D I E K Y L R R I D -E E H G T Q Y C P T G F A R L R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;