3D Structure for MGV-GENOME-0372652_CDS_0057 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.33 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0372652_CDS_0057 1 AcrIE6 0.71 View Alignment MGV-GENOME-0372652_CDS_0057 M F G K K K K P F N P -Y E N -R A D D L I Y -E -L W E E R D R L Y E K T R Q V I -T -R -V -G V I D L -Y P D -G (60)
M L +
AcrIE6 M -N ---N ----D -T E V ----L E -Q -Q ----I K A F E L L A D E L K D -R -L -P -T ---L -E I L -
MGV-GENOME-0372652_CDS_0057 A D R K K A V S D A E K A K Q S L L V A I -G -A -Y D -T -T -R -M -E -Y -N -D -Y -V E K N A E K F D S H K E (120)
+ + +E E H
AcrIE6 ------S P M Y T A V M V T Y ----D -L -I G -K -Q -L -A -S -R -R -A -E -L I E I L E E Q Y P G H A -
MGV-GENOME-0372652_CDS_0057 K W T T T S H -E I I E W A Y K Y Y Y K -G (142)
K
AcrIE6 A -----D L -----S I K N L --C P
MGV-GENOME-0372652_CDS_0057 2 AcrIE1 0.64 View Alignment MGV-GENOME-0372652_CDS_0057 M F G K K K K P F N P Y E -N -R -A D D L I Y E L W E E R D R L Y E K -T R Q V I -T R V G V I D L Y P D G A D R K K (60)
M K L + +
AcrIE1 M -E --K -K ---L -S -D -A ----Q V A L V A A W R K ----Y -P D L R E -----------------
MGV-GENOME-0372652_CDS_0057 -A -V S D A E K A K Q S L L V A I G A Y D T T R M E Y N D Y V E -K N A ---E ----K F D S H K E K W T T T S H E (120)
+A + + ++ + + E Y+ + E D + KW E
AcrIE1 S -L -E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E
MGV-GENOME-0372652_CDS_0057 I I E W ----A -Y K Y Y Y -K -G (139)
+
AcrIE1 V N Q H G I R V -Y G D A I D R D V D
MGV-GENOME-0372652_CDS_0057 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0372652_CDS_0057 M F G K K K K -P F N P Y E N R A D -D L I Y E L W E E R D R -L Y E K T R Q V I T R -V -G V I D L Y P D G A D R K K (60)
M ++ + + + K
AcrIIC4 M -K --I T S S N --F A ----T -I A ----T -S E -N -----------F -A -K L S V -----L P K -
MGV-GENOME-0372652_CDS_0057 A V S -D -A -E -K -A K Q S L L V A I G A Y D T T R M E Y N --D Y V E K N A E K F -D S H K E K W T T T S H E I I (120)
+K A+ + R Y AEKF +I
AcrIIC4 ---N -H -R -E -P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E K F N K E A V N E A V E K L Q K A I
MGV-GENOME-0372652_CDS_0057 E W A Y K Y Y Y K G (130)
+ A K
AcrIIC4 D L A E K Q G I Q F
MGV-GENOME-0372652_CDS_0057 4 AcrIF23 0.59 View Alignment MGV-GENOME-0372652_CDS_0057 M F G K K --K K ------------P F ---------N P ---Y --------E ----N ----R ---(60)
M P Y
AcrIF23 M T -N F Q T W L D S A D I P V Q Q N G Q W -I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G -I D A R A V A K
MGV-GENOME-0372652_CDS_0057 -A D ----D L I -Y E L W E E R -D R L -Y E K T R Q V I T R V G V I D L Y P D G A D R K -K A -V S D A E K A K Q (120)
E + EK Q + S + A
AcrIF23 T F G G R A L T G T A -R Q K E W A E K -I R A E K V Q Q M N Q D Q A E M A ---------C D -P -S G L L T A A K
MGV-GENOME-0372652_CDS_0057 S L L V A I G A Y D T T R M E Y N D Y V E K N A E K F D S H -K E K W T T T S H E I I E W A Y -K Y Y Y --K -G (177)
+ + + S I+
AcrIF23 F W I E N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A -L T A R W -G F
MGV-GENOME-0372652_CDS_0057 5 AcrIF3 0.55 View Alignment MGV-GENOME-0372652_CDS_0057 M F G K K K K P F N P Y E N -R A D D L I Y E L W E -E R D R L -Y -E -K -T -R Q V I T R V G V I -D L Y P D G A D (60)
M +I R + + + D
AcrIF3 M S S T I S D -------R ----I I S ----R ----S V -I -E -A -A R F I Q S W E D A D P D N L -T E S Q
MGV-GENOME-0372652_CDS_0057 R K K A V S D A E K A K Q S L L V A -I G A Y D ---------T -T -R -M -E -Y -N D Y -V -E K N A -----(120)
A S A +++ L + + +
AcrIF3 V L A A S S F A A R L H E G L Q A T V L Q R L V D E S N R D E Y R -E -F -Q -A -W -E -E A L -L N A D G R V T S N
MGV-GENOME-0372652_CDS_0057 ------------E K F D -----S -H K E ----K W -T T T S H E I -I -E -W -A -Y K -Y -Y -Y K -- (180)
+ I
AcrIF3 P F A D W G W W Y R I A N V M L A T A S Q -N V G V A W G S H V H -G R L M A I F -Q -D -R -F Q -Q -H -Y E D E E
MGV-GENOME-0372652_CDS_0057 G (181)
AcrIF3 C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;