3D Structure for MGV-GENOME-0372012_CDS_0145 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0372012_CDS_0145 1 AcrIIA27 0.72 View Alignment MGV-GENOME-0372012_CDS_0145 M G I W K I I Y I -T -E ------S -G Y E G E V E V G A V N K F M A W D M F N D I A K D F ---N E K V ---V S (60)
M + II + V A N+ A+ +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
MGV-GENOME-0372012_CDS_0145 ----------A D C F L V G E N (79)
V E
AcrIIA27 I D N T H R R A W G R R Y L R V E E A
MGV-GENOME-0372012_CDS_0145 2 AcrIC9 0.66 View Alignment MGV-GENOME-0372012_CDS_0145 M G ----I -W -K I I Y I T E S G Y E G E V E V G A V N K F M A W D M F N D I A K D F -N E K V V S A D C F L V --(60)
M KI + + + + + + V ++
AcrIC9 M E T K M T S F -Y K I -T A -Y N -S Q A L Y -F -W G T D A D V D R Y V D W L N R -D R E I N V Y A --A E A I P E
MGV-GENOME-0372012_CDS_0145 -----------------------G --E N (88)
E
AcrIC9 A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
MGV-GENOME-0372012_CDS_0145 3 AcrIE2 0.66 View Alignment MGV-GENOME-0372012_CDS_0145 M G I W K I I Y I T E S G Y E G E V E V -G A V N K F M A W D M F N D I A K D F -N E K V V S A D C F L V -------(60)
M I + V + +A E +
AcrIE2 M N T Y L I D P R K N N D N -S G E R -F -T V D A V D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S N G S G
MGV-GENOME-0372012_CDS_0145 -------------------G -----E N (87)
E
AcrIE2 M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
MGV-GENOME-0372012_CDS_0145 4 AcrIF9 0.56 View Alignment MGV-GENOME-0372012_CDS_0145 M G -I W K I I Y I T E -S G Y E G E V E V G A V N K F M A W D M F N D I A K D F N E K V V S A D C F L V ------G (60)
M + I ++ + + A + A + F V V
AcrIF9 M K A A Y I I K E V Q N I N S E R E G T Q I E A T S L S Q A K R I A S K E Q C -F H G T V --M R I E T V N G L W L A Y
MGV-GENOME-0372012_CDS_0145 --------E -N (71)
+ +
AcrIF9 K E D G K R W V D C Q
MGV-GENOME-0372012_CDS_0145 5 AcrIIA20 0.54 View Alignment MGV-GENOME-0372012_CDS_0145 M G I W K I I Y I T E S G Y E -G E V E V G -A V -N K F M A W D M F N D I A K D F -----------N ----E K (60)
M + V + D+ K+ N +
AcrIIA20 M K N Y E V ----T ---N E --V K N -L -N T Q -V E T I G Q A V D L Y K E Y G S N T I V W S I D K N E D L I D E
MGV-GENOME-0372012_CDS_0145 V V S A -D C F L V ---G -E --N (79)
V +
AcrIIA20 V T E L V A E -Y -A E K -G T V I K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;