3D Structure for MGV-GENOME-0371512_CDS_0222 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.66 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0371512_CDS_0222 1 AcrIIA27 0.72 View Alignment MGV-GENOME-0371512_CDS_0222 M K N E L Y V -V K D I -P Q -Y --S E D -V S N Y C Y V V K A T S Y D E A I E I V K N K ---T G H N W --E W D V (60)
MK + + S + V N Y V A + EA ++ + + D+
AcrIIA27 M K -T F N -I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L
MGV-GENOME-0371512_CDS_0222 E L -A ------D ---N -D E V W -Q (82)
+ V
AcrIIA27 T A I D N T H R R A W G R R -Y L R V E E A
MGV-GENOME-0371512_CDS_0222 2 AcrIE2 0.69 View Alignment MGV-GENOME-0371512_CDS_0222 M K N E L Y V V K D I P Q Y S E D V S N Y C Y V -V K A T ----S Y -D E -A I -E I V K N K T G H N W E ----W -(60)
M N Y++ ++ A A I+
AcrIE2 M -N -T Y L I D P R -K N N D N S G E R F T -V -D A V D I T A A A K -S A A -Q Q I L G E E F E G L V Y R E T G -E
MGV-GENOME-0371512_CDS_0222 --------D V E L ---A ------D --N D E V -W Q (92)
V
AcrIE2 S N G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
MGV-GENOME-0371512_CDS_0222 3 AcrIC9 0.65 View Alignment MGV-GENOME-0371512_CDS_0222 M K --N -E L Y V V K D I P Q Y S E D V S N Y C Y V V K -A T S Y D E A I E I V K N K ---T -G -H N W -E W -D V (60)
M Y + S+ Y + ++ V N +
AcrIC9 M E T K M T S F Y K I T A --Y ----N S Q A L Y F --W -G T D A D V D R Y V D W L N R D -R -E I N -V -Y A -A
MGV-GENOME-0371512_CDS_0222 E L -A --------D N ----------D --E V ---W -Q (95)
E+ +
AcrIC9 E A I P E A E W A Q Y E G -R D D V L S G E E C G W D D F M S A -E A
MGV-GENOME-0371512_CDS_0222 4 AcrIIC1 0.57 View Alignment MGV-GENOME-0371512_CDS_0222 M K N E L Y V V K D ------------------------I ---P Q -Y -S E -D V S -N -Y C Y V V K A T (60)
M N Y + + D +
AcrIIC1 M A N K T Y K I G K N A G Y D G C G L C L A A I S E N E A I K V K Y L R D I C P D -Y D G D D K A E -D W L R W G T D S
MGV-GENOME-0371512_CDS_0222 S Y D E A I E I V K N -K -T -G H N W E W D V E L A D N D E V W -Q (95)
+ ++ V A E
AcrIIC1 ---R V K A A A L -E -M -E -Q Y A Y T S V G M A S C W E F V E L
MGV-GENOME-0371512_CDS_0222 5 AcrIF9 0.56 View Alignment MGV-GENOME-0371512_CDS_0222 M K N E L Y V V K D I P Q Y S E D V S N Y C Y V V K A T S Y D E A I E I V K N K T G H N W E W --D V E L A -----D (60)
MK +Y++K++ + + + ATS A I+ + +E +
AcrIF9 M K -A A Y I I K E V Q N I N S -E R -E G T Q I E A T S L S Q A K R I A S K E Q -C F H G T V M R I E T V N G L W L A
MGV-GENOME-0371512_CDS_0222 ----N -D E V --W -Q (74)
Q
AcrIF9 Y K E D -G K R W V D -C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;