3D Structure for MGV-GENOME-0370181_CDS_0081 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.82 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0370181_CDS_0081 1 AcrIIA21 0.71 View Alignment MGV-GENOME-0370181_CDS_0081 M K F P N Q K T V V I A N K E P M D N V H T Y Q R L T N E T A I K V --G K L S L W G I R V W F Y L N K N ---K -E -(60)
M + + + LS+ I V L E
AcrIIA21 M D Y -D N E --N -------------Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K
MGV-GENOME-0370181_CDS_0081 -------R Y E L E L S P Q A I L N W Y G I T T D C R -K G V R N G I Q E L F D E G F L K Q E --G E K -L V F -Y (120)
L ++ + Q L + + E
AcrIIA21 G W I D T D G S I Y L N F K L I E L A K M F S C S R ---T -T M I D V M Q R L E E V N L I E R E R V D -V F Y G Y S L
MGV-GENOME-0370181_CDS_0081 --Q -K --P -P -A G (133)
AcrIIA21 P Y -K T Y I -N -E -V
MGV-GENOME-0370181_CDS_0081 2 AcrIA3 0.51 View Alignment MGV-GENOME-0370181_CDS_0081 M K F P N Q K T V V I A N K E P M D N V H T Y ---Q R L T N -E -T -A -I -K V G K ---L ------------(60)
M F I KE + + +
AcrIA3 M S F -Y I -M -Y I K V K E M -S E Q K -Q I S L R S K Q K E -L -L -Q -R -F F E I A E V D E N G D L C I P L Y D
MGV-GENOME-0370181_CDS_0081 ----------S L W G I R V W F Y L N K N K E R Y E L E L S P Q A I L N W Y G I T T D C R K G V R -N G -I Q E L (120)
Y + I +
AcrIA3 S S G D L T L F K Q D S R K Y Q M Y A Y -F R I L R --L -------I ----K K ----Q I F F -I -K V -K K V
MGV-GENOME-0370181_CDS_0081 F D E G -F L K Q E G E K L V -F Y Q K P P A G (144)
+ FL +
AcrIA3 K R D K K F L C M H S N V I D Q -V K S V L E S
MGV-GENOME-0370181_CDS_0081 3 AcrIE5 0.43 View Alignment MGV-GENOME-0370181_CDS_0081 M K F P N Q K T V V I A N K E P M D N V H T Y Q R L T N E T A I K V G K L S L W G I R V W F Y L N K N K E R Y E L E L S (60)
M N + + +
AcrIE5 M ---------S -------------N D R N G I I N Q I I D Y T -------------------G --
MGV-GENOME-0370181_CDS_0081 P Q A I L N W Y G I T T D C R K G V R N G I Q E L F D E G F L K Q -----E -G E K L V F --Y ---Q ----K P P (120)
R + EL + + L+
AcrIE5 ---------T ---D R D H A E R I Y E E L R A D D R I Y F D D S V G L D R Q G L L I R E D V D L -M A V A A E -
MGV-GENOME-0370181_CDS_0081 A -G (123)
AcrIE5 -I E
MGV-GENOME-0370181_CDS_0081 4 AcrIF17 0.41 View Alignment MGV-GENOME-0370181_CDS_0081 M K F P N Q K T -V --V I A --------N ---K ---------E P M D N ---V --H T Y Q R L T N E T A I (60)
M K V + +
AcrIF17 M F -S E I K F S S L S D H -A L A E L I K M A M E E F Q Q R L I K P G V N T I K -T V D V E P V V L H A P S D N E M V
MGV-GENOME-0370181_CDS_0081 K V G K L ---S L W G I R V W F Y L N K N K E R Y E L E L S P Q -A I L N W Y G I T T D C R K G V R N G I Q E L F D E (120)
+ G + R +W V
AcrIF17 F I N N C L K K R R A G E Y I H A S M K D K -Y R D ----L T R K -Y P Q W F S --------V ---K ---A --
MGV-GENOME-0370181_CDS_0081 G F L K Q E G E K -L V F Y Q K P -P -A G (142)
Y
AcrIF17 -Y P D D L R G S V S K H Y V D Y F T K K E
MGV-GENOME-0370181_CDS_0081 5 AcrVA2 0.41 View Alignment MGV-GENOME-0370181_CDS_0081 M K F -P N ----Q K T V V I A N -K -E P M -D N V H T Y Q R ---------------L T N E T A I K V -G K (60)
M+ + + N + + ++ +
AcrVA2 M H H T I A R M N A F N K A F A -N A -K D C -Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L
MGV-GENOME-0370181_CDS_0081 -----L ------------------------------------------------------ (120)
AcrVA2 R G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P D W C V Y
MGV-GENOME-0370181_CDS_0081 -------------------------------S L W G I R V W F Y L N K N K E ------R Y E L -E L (180)
+ V + +
AcrVA2 V D I S S A Q I A T F D D G V A K H I K G F W A I Y D I V E M N G I N H D V L D F V V D T D T D D N V Y V P Q P F I L S
MGV-GENOME-0370181_CDS_0081 S P Q A I L N W Y ---G I T T D C R -K G -V R N G I Q E L F D E G F -L K Q --------------------(240)
S Q ++ D + I L L
AcrVA2 S G Q S V A E V L D Y G A S L F D D -D -T S -N T L I K G L L P Y L L W L C V A E P D I T Y K G L P V S R E E L T R P
MGV-GENOME-0370181_CDS_0081 ----------------------------------------------------------E - (300)
AcrVA2 K H S I N K K T G A F V T P S E P F I Y Q I G E R L G S E V R R Y Q S I I D G E Q K R N R P H T K R P H I R R G H W H G
MGV-GENOME-0370181_CDS_0081 --------------G -E K L V F -Y Q K P P A G (329)
+VF +
AcrVA2 Y W Q G T G Q A K E F R V R W Q -P A V F V N S G R V S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;