3D Structure for MGV-GENOME-0369781_CDS_0072 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.94 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0369781_CDS_0072 1 AcrIIA7 0.79 View Alignment MGV-GENOME-0369781_CDS_0072 M D F S D A L K N V K T G K K I F R L G W N G K G M F V V Y Q -K G -Y P N G -I P --------C -N -H -Q T A L (60)
M F AL ++K G+ + R GWNGKGMF+ P+ I ++
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E -S -F -K R W V A
MGV-GENOME-0369781_CDS_0072 A W G M -N E G E L F K C N P Y L Q I K N V D G S H -S M W V P S V G D I L A D D W E V I R (106)
+E + K + YL K +DG+ + W+ S D LA DW ++
AcrIIA7 N N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
MGV-GENOME-0369781_CDS_0072 2 AcrVIA3 0.54 View Alignment MGV-GENOME-0369781_CDS_0072 M D F S D A -L K N V K T G K K -I F R -L G W N G K G M F V V Y Q K G Y P N G I P C N H Q T A L A W G M N E G E L F K (60)
M + K ++ G + V G + + G
AcrVIA3 M F -K E F L E K C L R Y G -N L -Y I L E E -T -G D R K K V K R I S K R H G K V T E A -S -V -L L F D S G T K R T
MGV-GENOME-0369781_CDS_0072 C N -P Y L Q I K N V D G S H S M W V P S V G D I L A D D W E V I R (94)
+ + G + L +
AcrVIA3 T I N E -I Y L N -S Q G Y F I I R D -Q K -R -L -K L E -K F K
MGV-GENOME-0369781_CDS_0072 3 AcrIIA4 0.53 View Alignment MGV-GENOME-0369781_CDS_0072 M D F S D A L K N V K T -G K K I F R L G W N G --K G M -F V V Y Q -K G Y P N G I P C N -H Q T A L A W G M N E G E (60)
M +D+++ +K+ + G + + + + +
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N N -D G N E Y V -I S E -S E --N -E S I V E K
MGV-GENOME-0369781_CDS_0072 L F K C -N -P Y -L Q I K N V D -G S H S M W V P -S V G D I L A D D -W E V I R (102)
+ + I +
AcrIIA4 F I S A F -K N G W -N -Q E -Y E -D E E E F Y N D -M Q T I T ---L K S E L N
MGV-GENOME-0369781_CDS_0072 4 AcrIF18 0.52 View Alignment MGV-GENOME-0369781_CDS_0072 M D F S D A L K N V K T G K K I F R L G W N -G K G M F V V Y Q K G Y P -N G I P C N H Q T A L A W G M N E G E L F --(60)
M + K I + W GE F
AcrIF18 M T T --I ----K A A Y -I S K D Q N W N D G T ---------T T -----------Y W F D V N G E T F G V
MGV-GENOME-0369781_CDS_0072 -K -C -N -P --Y L -Q I K N V D G S H S -M W V P S V G D I L A D D W E V I -R (103)
+ + + DG S + + I
AcrIF18 V H G -G -E S W N -A K -V V D C D G A P S D Q Y T V D Q F N --I T -E D M I A E
MGV-GENOME-0369781_CDS_0072 5 AcrIIA12 0.51 View Alignment MGV-GENOME-0369781_CDS_0072 M D -F ---S -D A L ---K N V K -T -G K K I F R L -G -W N -G -K G M F V V Y Q K G Y P N G I P C N H Q T A L (60)
M D++ KN+K +
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S -V E R N T R E A A T Q Y F R C -P E K -H V ------S
MGV-GENOME-0369781_CDS_0072 A W G M N E G E L F K C N P Y L Q I K N V D G S H S M W V P S V G D I L A D -D W E V I R (105)
G GE F I E +
AcrIIA12 D A G V Y Y G E D F E F D G F -E I F -E -D D L I Y T R S ---Y ----D -K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;