3D Structure for MGV-GENOME-0368493_CDS_0127 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.08 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0368493_CDS_0127 1 AcrIIA7 0.75 View Alignment MGV-GENOME-0368493_CDS_0127 M K F G D A I E A M K C G A R V Q R S G W N G K N Q Y I E L -----------A N C I S Y I N S -R N E I V N C E -(60)
M FG A+E K G V R GWNGK I +N + + V
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A N -N
MGV-GENOME-0368493_CDS_0127 H -D A -I ---G -N Q A I A F V G T G -G I Q M G W L A S Q A D M L A A D W K I C E (104)
H D + + I GWLASQ DMLA DW I E
AcrIIA7 H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
MGV-GENOME-0368493_CDS_0127 2 AcrIIA4 0.56 View Alignment MGV-GENOME-0368493_CDS_0127 M K F G D A I E A M K C -G A R V Q R S G W N G K N Q Y I E L A N C I S Y I N -S R N E I V N C E H D A I G N Q A I A F (60)
M D+I K V SG + + I +N +++
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D ----S N S I T Q L I I R V N N -D G N E Y V I S E S -E N E S I V E K
MGV-GENOME-0368493_CDS_0127 V G T ----G G I Q M G W L A S Q A D M L A A D ----W K -I C E (95)
+ K
AcrIIA4 F I -S A F K -N G W N Q E Y E D E E E F Y N D M Q T I T L K S E L N
MGV-GENOME-0368493_CDS_0127 3 AcrIF18 0.52 View Alignment MGV-GENOME-0368493_CDS_0127 M K F G D A I E A M K C G A R -V -Q R S G W -N -G K N Q Y I E L A N C I S Y I N S R N E I V N C E H D -A I G N Q A (60)
M + + N G D
AcrIF18 M T --T I -K ---A A Y -I -S -K D Q N W N D G ----T ----T T -----------Y W F D V -N -G E T
MGV-GENOME-0368493_CDS_0127 I A -F V G T -G G I Q M G W L A ----S Q A D M L A -----A D W K I C -E (101)
G + + + + E
AcrIF18 F G V V H G -G E S W N A K V V D C D G A P S D Q Y T V D Q F N I -T E D M I A E
MGV-GENOME-0368493_CDS_0127 4 AcrVIA3 0.51 View Alignment MGV-GENOME-0368493_CDS_0127 M K F G D A I E A M K -C -G A R V Q R S G W N G K N Q Y I E L A N C I S Y I N S R N E I V N C E --H -D -A I -G -(60)
M + +E G + + + +
AcrVIA3 M F -K E F L E K C L R -Y G N L Y I L E E T G D R K K V K R I S K ------R H G K V T E A S V L L F -D S G T K R
MGV-GENOME-0368493_CDS_0127 --N Q A I A F V G T G G I Q M G -W L A S Q A D M L A A D -W -K -I C E (98)
+ I G + L
AcrVIA3 T T I N E I Y L N S -Q G Y F I I R -D -Q -K -R L -K -L -E -K -F K
MGV-GENOME-0368493_CDS_0127 5 AcrIIA12 0.51 View Alignment MGV-GENOME-0368493_CDS_0127 M K -F ---G -D A I ---E A M K -C -G A R V Q R -S G -W -N G ---K -N Q Y I E L A N C I S Y I N S R N E I (60)
M D+I K + S N +QY ++
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S -V E R N T R E A -A T Q Y F R C P E -K -H V S D A G V Y
MGV-GENOME-0368493_CDS_0127 V N C E H D A I G -N Q A I A F V G T G G I Q M G W L A S Q A D M L A A D W K I C E (102)
E + D
AcrIIA12 -Y G E D -F E -F -D G F E I F E -D D L I Y T R S ---Y -----D K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;