3D Structure for MGV-GENOME-0367574_CDS_0096 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.09 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0367574_CDS_0096 1 AcrIIA21 0.71 View Alignment MGV-GENOME-0367574_CDS_0096 M D ---A A K R ----L ---------S P S A F E I Y L Y L V S N ------------N -G N I Q N L S P K (60)
MD L S +Y+ L N
AcrIIA21 M D Y D N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G S I Y L N F K L I
MGV-GENOME-0367574_CDS_0096 N I E N S L G I K R A T Y Y E A L G K L E E A G Y L Y R E --D ---G V L K --F C A S L L E E K K (111)
+ R T ++ +LEE+ + RE D G
AcrIIA21 E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G -Y -S L -P Y K T Y I N E V
MGV-GENOME-0367574_CDS_0096 2 AcrIA3 0.55 View Alignment MGV-GENOME-0367574_CDS_0096 M D --A -A -K R ---L --------S P S A F -E I -Y L Y L V S -N ---N -G N I Q N L S P K N I E N S L G (60)
M + + G + +
AcrIA3 M S F Y I M -Y I K V K E M S E Q K Q I S L R S K Q K E L -L Q R F -F E I A E V D E N G D L C I P L Y D S S G D L T L
MGV-GENOME-0367574_CDS_0096 I K R -A T Y Y E A L G K -L E E -A G Y L Y R -------E ---D ---G V -L K -F -C A ---S -L -L E E -(120)
K Y L + L
AcrIA3 F K Q D S R K Y Q M -Y A Y F -R I -L R L I K K Q I F F I K V K K V K R D K K -F L -C -M H S N V I D Q -V K S V L
MGV-GENOME-0367574_CDS_0096 K K (122)
AcrIA3 E S
MGV-GENOME-0367574_CDS_0096 3 AcrIE5 0.50 View Alignment MGV-GENOME-0367574_CDS_0096 M D A A K R L S P S A F E I Y L Y L V S N -N G N I Q N L S P K N I E N S L G I K R A T Y Y E A L G K L E E A G Y L Y R (60)
M + I ++ G R + L +Y
AcrIE5 M S N --D R N G ----I I N Q I I D Y T ----------------G T D R D H A E R I Y E E L R A D D R I Y F
MGV-GENOME-0367574_CDS_0096 -----E -D -G V L K F C -A -S ---L -L E E K K (89)
L + E
AcrIE5 D D S V G L D -R Q G L L I R E D V D L M A -V A A E I E
MGV-GENOME-0367574_CDS_0096 4 AcrIF16 0.43 View Alignment MGV-GENOME-0367574_CDS_0096 M D --A A K R ---L ------------------------------------------------(60)
M K +
AcrIF16 M S L S D K K E Q K E A Y L D A L R I A P L D R G V L K R I H A V N D N T L D K W L Y V A D R Y P T F R A C W E L W M F
MGV-GENOME-0367574_CDS_0096 ----------------------------------S P S A -F -E I Y L -Y -L V S -N ---N -G N (120)
+ Y V+ +
AcrIF16 Q R K R R V L I S R K L H V L I N R S T N R T I E A F E K T Y P P E E R V V G -K S -Y R D -L -V T E K G E R S A N M
MGV-GENOME-0367574_CDS_0096 -I Q ---N L S P K N I E N S L -G I K R A T Y Y E A L G K L E E A G Y L Y R E D G V L K F C A -S L L E --E -K K (180)
I + K + L +Y + K +G +
AcrIF16 Y I I N G E V V G A K D A S I L L G Y ---S S Y N T L Y A K M K R L G I -Q P -G D D I S H L K P E K R G R K K E C S
MGV-GENOME-0367574_CDS_0096 5 AcrIIA25 0.42 View Alignment MGV-GENOME-0367574_CDS_0096 M D --A A -K R -------L ------------------S P S A F E I Y L Y L V S N N G N -I Q N L S P K (60)
M ++ R + + L++ +
AcrIIA25 M K N R L L G S R Y T D A I K N D C G T A N K M S N I Y N K L N K D S L R E I H S A L Y G L L T A G Y D I S ---N M -
MGV-GENOME-0367574_CDS_0096 N I E N S L G I K R A T Y Y E A L G K L E E A G Y L Y R -E D G V L K F C A S L L E -E -K K (107)
+ G L +K L K
AcrIIA25 ------R -N I E E L E K Y V N L K K S R G Q L L N V S S D D I K L Y H K L F V I R F G K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;