3D Structure for MGV-GENOME-0363041_CDS_0125 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.00 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0363041_CDS_0125 1 AcrVA5 0.71 View Alignment MGV-GENOME-0363041_CDS_0125 M I Q K Q T W K D E I R I L I T D E E N -L G S V Q I S I P L Y H S D I F G K A D A L I Y A L F V D N N H R R N G V A Q (60)
M G + SI ++ I + V + +R+G+ +
AcrVA5 M -K -I E L ---------S ---G -G Y I C Y S I --E ------E D E V T I D M V E V T -T -K R Q G I G S
MGV-GENOME-0363041_CDS_0125 H L L Q L A E Q Q A K L S G V K T I G L E F N -K -E -E S E S F V L K W Y L K N G Y K P F S K -K S N L L I K E L E D (120)
L+ + A+ IGL + S ++ +Y N L +
AcrVA5 Q L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M R -W -S
MGV-GENOME-0363041_CDS_0125 2 AcrIB1 0.70 View Alignment MGV-GENOME-0363041_CDS_0125 M I Q K -Q -T ---W ---------------------------------------K D -E -I R I L (60)
M + ++
AcrIB1 M E -S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V
MGV-GENOME-0363041_CDS_0125 I T -D E E N L G S V Q I S I P -L -Y ---H -S -D -I F ------------------G -K A D A L I Y A L (120)
+ D E LG +I L + L+ L
AcrIB1 F S E D N E I L G Y F T I A N R S L V I P K E N F -G -I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L
MGV-GENOME-0363041_CDS_0125 F V D N -N H -R R N G V A Q ----H L L -Q -L A E Q -Q -A K L S G V K T I G L E F N K E E S E S F V L K W Y L K (180)
+ L L VK I LE + E ++ +Y
AcrIB1 G K N Y S D D I E N L I T G R E L L T F A -Y -D L F L -K -I K E L I N V K Y I W L E C Q N ---E P K L I S F Y Q N
MGV-GENOME-0363041_CDS_0125 N G Y K P F S K --K ---S N L L I K E L E D (204)
G K + I EL
AcrIB1 F G F K M L E S L T S E E G L K V M I M E L -K
MGV-GENOME-0363041_CDS_0125 3 AcrIF5 0.42 View Alignment MGV-GENOME-0363041_CDS_0125 M I Q K Q T W K D E -I R I L I T D E E N L G S V Q I S I P L Y H S D I F G K A D A L I Y A L F V D N N H R R N G V A Q (60)
M + + + + + + +
AcrIF5 M -S ----R -P T V V T V T E ---T P R -N ---P G -S Y E V N V E R D G K M V V G R A R -A G ----S D P G
MGV-GENOME-0363041_CDS_0125 H L L Q L A E Q Q A K L S G V K T I G L E F N K E E S E S F V L K W Y L K N G Y K -P F S K K -S N L L I K E L E D (118)
++ A Q A G + + S + K + L
AcrIF5 A A A A K A M Q M A M E W G S P N Y V I L G ----S -N ---K V L A F ----I -----P -E Q L R V -K -M
MGV-GENOME-0363041_CDS_0125 4 AcrIIA28 0.40 View Alignment MGV-GENOME-0363041_CDS_0125 M I Q K Q T W K D E I R I L I T D E E N L G -S V Q I S I P L Y H S D I F G K A D A L I Y A L F V D N N H R R N G V A Q (60)
M K L +
AcrIIA28 M -K T I F T K K Q T E E --L ----L N D -----------------------I -------S I E K Q K
MGV-GENOME-0363041_CDS_0125 H L L Q L A E Q Q A K L S G V K T I G L E F -N -K E -E ----S E S F V L K W Y L K N G Y K P F S K K -----S N (120)
L + +K + + E L
AcrIIA28 E L F N S M H D F R S Q -H A K E A R I P -G -W S -D -K Y N K L E K K M L S D F E E V T G I K Y D T L E S E L I W D
MGV-GENOME-0363041_CDS_0125 L L I -K -E L E -D (131)
L L
AcrIIA28 N L S N -K F L Y N S
MGV-GENOME-0363041_CDS_0125 5 AcrVIA1_Lse 0.40 View Alignment MGV-GENOME-0363041_CDS_0125 M I Q K ---Q T ----W ---------K -------D -E -I R I L I T --D E E N L -G S -V Q I S I P -L (60)
MI + +
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K -A E F E I Y S R E N Y S K Y N K -W F E M W K S P -
MGV-GENOME-0363041_CDS_0125 -Y H S D I F G K A D A L I Y -A L F --V D N N H R R N G V A Q ----H L L ----Q -------------L A (120)
+F K +LF + G+ + +
AcrVIA1_Lse T S S -L V F W K N Y S F R C H L L F V I -E K D G E C L G I P A S V F E S V -L Q I Y L A D P F A P D T K E L F V E V
MGV-GENOME-0363041_CDS_0125 E Q Q A K L S -G V K T I G L E -F -N ---K ----E E S E -S ------------------F V L K W Y L K (180)
+ T +E F +E L +
AcrVIA1_Lse C N L Y E C -L A D V T -V V E H F E A E E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T I A T
MGV-GENOME-0363041_CDS_0125 ---------N G Y -K P ----F -S K K --------------------S N -------L L ----I (240)
K
AcrVIA1_Lse N K K S Q K Y N Q I Q -G K -I Q E I -N K E -I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L -
MGV-GENOME-0363041_CDS_0125 -K E -L E D (247)
AcrVIA1_Lse K E -E -L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;